Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1626 ATGGGTTACGAAAACGATCTGTATCGTGATGAGGATGGAGAACCCTTGATGGACTATGATGACGTGCAATCCGATCGCGAGCTCTCGCCTGAACCCCAACAGCAAGGTCTATTCGACGATTTGGAGGAAGACGTCGATGATTGGCGCGGGCGAGAACGATCTCAGACTCCTGTTTACGATAATGATTCGTCCATGTCAAAGGCGAAGCCTAGAAAGAGGCTTATCAAGAAAGGTGACACTGGGAGCCAGTCTGTGGCTCCAGAGCTTGCTGACGAGGATGAGGAAGACGATGGTAATATTCCGGCAAGTTTCGTGAGGGATGGGTCTGAGGAGGAGGAAGGAAGAAAGAGGAAGGGGAAGGATGGTGGCAGTGGGAAGAAGGAGAAGAGGCACAAAGGGGAGAAGAGGATGGGGAGCAGTGGTAAAGGCGGCTCTAAATCTGGGCTGCCGAAGAAAGCTTTTGCGGCTAAGGCCGGAAAGGATCATGATGGCGATGTCAAGGAGATGTGGGATACAATTGCTGGCGGTGACTCTGAGGATGATCACGAGGGTGTCAGGACAGTCGATGATGATAATTTCATAGATGACACAGGGGTGGAGCCTGCTATATACGGTAGTGATAATGAAGCTCGTTCTCCTAGTAGATATGCCCAGGCAGAGGAAGGTGAGGAGGATGATGAGATCAAGGAACTTTTCAAGATGGGTAAGAGGAAGAAGAAGAATGAGAGAAGCCCTGCAGAGATAGCTTTGCTAGTTGAGAATGTCATGGCTGAACTTGAGGTTACAGCTGAAGAGGATGCTGAATTAAATAGACAGGGGAAGCCTGCCATAAATAAGCTGAAGAAGTTGCCTCTTTTAACTGAAGTCCTTGCAAAGAAACAACTTCAACAGGAGTTTTTAGATCATGGAGTGCTAACCTTATTGAAGAATTGGCTTGAACCCCTCCCAGACGGAAGCTTGCCAAACATAAATATCCGCACGGCAATTTTGAATATTTTGAATGATTTTCCTATAGACCTTGAGCAGTATGATAGAAGAGAACAGCTGAAGAAGAGTGGTCTCGGAAAGGTCATTATGTTTTTGTCAAAATCTGATGAAGAAATCAGTGTAAATAGGAAACTAGCTAAGGAGCTGGTTGATAAATGGAGCCGACCTATATTTAACAAGAGTACAAGATTCGAAGACATGAGAAATGTCGAAGAAGACAGGATTCCTTTCAGAAGGCCTTCAGTGAAGAAGCCTGTAAATAAAGCGTCAGGGATTGAATCCAGAGATGGTGATCTTGAATTAGAATTTTCACAGAGAAAGTCTGGACAACCATCTTCTAGACAACTTACCACTAGACCAGAAGCAACACCATTGGATTTTGTGGTGCGGCCCCCATCTAAAGTTGACCCAGAAGAGATTAGGGCCCGCGCAAAACAAGCTGCACAAGATCAACACCGAATGAAGATGAACAAGAAGCTACAAAATTTGAGGTTACCGAAAAAGAAGCAGCTTCAAGCCACAAAGTTGAGTGTCGAAGGTCGAGGAATGACCAAGTATCTGTAA 1551 0.4565 MGYENDLYRDEDGEPLMDYDDVQSDRELSPEPQQQGLFDDLEEDVDDWRGRERSQTPVYDNDSSMSKAKPRKRLIKKGDTGSQSVAPELADEDEEDDGNIPASFVRDGSEEEEGRKRKGKDGGSGKKEKRHKGEKRMGSSGKGGSKSGLPKKAFAAKAGKDHDGDVKEMWDTIAGGDSEDDHEGVRTVDDDNFIDDTGVEPAIYGSDNEARSPSRYAQAEEGEEDDEIKELFKMGKRKKKNERSPAEIALLVENVMAELEVTAEEDAELNRQGKPAINKLKKLPLLTEVLAKKQLQQEFLDHGVLTLLKNWLEPLPDGSLPNINIRTAILNILNDFPIDLEQYDRREQLKKSGLGKVIMFLSKSDEEISVNRKLAKELVDKWSRPIFNKSTRFEDMRNVEEDRIPFRRPSVKKPVNKASGIESRDGDLELEFSQRKSGQPSSRQLTTRPEATPLDFVVRPPSKVDPEEIRARAKQAAQDQHRMKMNKKLQNLRLPKKKQLQATKLSVEGRGMTKYL 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1626 516 Pfam TFIIS helical bundle-like domain 332 386 IPR017923 -
Alju12g1626 516 MobiDBLite consensus disorder prediction 461 486 - -
Alju12g1626 516 MobiDBLite consensus disorder prediction 434 449 - -
Alju12g1626 516 ProSiteProfiles TFIIS N-terminal domain profile. 306 389 IPR017923 -
Alju12g1626 516 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 299 389 IPR035441 -
Alju12g1626 516 Coils Coil 252 272 - -
Alju12g1626 516 MobiDBLite consensus disorder prediction 155 193 - -
Alju12g1626 516 PANTHER PROTEIN IWS1 HOMOLOG 1 1 516 IPR044204 GO:0009742|GO:0032784
Alju12g1626 516 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 245 392 IPR035441 -
Alju12g1626 516 MobiDBLite consensus disorder prediction 106 121 - -
Alju12g1626 516 MobiDBLite consensus disorder prediction 410 488 - -
Alju12g1626 516 MobiDBLite consensus disorder prediction 418 432 - -
Alju12g1626 516 MobiDBLite consensus disorder prediction 1 227 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Alju12g1626 Med26 2.3e-13 No_clan