Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1625 ATGGGTAGCAGTAAGATGGATAAAGCTTCAAATGACAAGGAGCCTAAGACACCTCCTGCTACGTCACAGGAGCATCCTTCAACCACCAGCACTGGAACCACTAATCCTGACTGGTCTAGCTTTCAGGCATATTCTCCTATACCTCCACACGGCTACTTGGCATCAAATCCCCATGCCCACCCGTATGTGTGGGGTGTCCAGCATATTATGCCTCCCTATGGTACTCCACCCCCACCACATCCCTATGTTGCAATGTATCCCCCTGGAGGAATATATGCCCACCCATCTATACCTCCGGGATCTTATCCTTTCAGTCCATTTGCCATGCCTGCTTCTAATGGTATTTCTGAGGCTGGAAATATACCTGCCAGCATGGGAAGTGATGCTAAGATTCCTGAGGTGAAGGAAAAATTGCCAATAAAAAGATCAAAAGGAAACTTGGGTGGTTTGAATATGTTTGCTGGGAAGAATAATGAATCTAGTAAAACACCAAGGATGTCTACTAATGGAATTCATCCGAAAAGTGGGGAGAGTTCAAATGAAGATACCAGTGAAGGAAGTGATGCAAATTCAGAGGATGACCTTGAGTACAGAACAGGGGGGAGGCGGAATTCTTTGCAAGTGTATGCTCCCCAAAATGGGGGAGTTAATTCACATCATAGAGATGTTGTTAACCAACCTATGCCTATCTCTGTTGCTGGTGCTCCTGGGGTGGTTCCTGGTCCCACAACAAACCTAAATATAGGAATAGATTATTGGGGAGCACCAACTTCAACTATTCCTGGGCTACATGGAAAGGTTCCCTCTACTGCAGTTGCTGAGGGGATGGCTACTGCTGGATCACATGATGGTGTTCAGTCACAACATTTGTTACAGGATGAAAGAGAGCTTAAAAGACAGAGGCGGAAGCAATCTAATAGGGAATCTGCTCGCAGATCCAGGTTACGCAAGCAGGCTGAATGCGAGGAACTAGCTCAACGAGCTGATGGTTTGAAAGAAGAAAATGCTTCCCTCCGTTCAGAATTGAGTCGAATCAAGAGCGAGTGTGAGCAGTTGCTCTCAGAGAATGCTGCACTCAAGGAGAGACTGGGGGAGTTGCCTGGAAAAGAAGATCTTGGGTCTAGCCGGAATGATGAAAATGTGAGAGATGAACATCAACAGACTGAGCAAGAGGAGGATGTGAAGGGTGGTCATTAG 1197 0.4645 MGSSKMDKASNDKEPKTPPATSQEHPSTTSTGTTNPDWSSFQAYSPIPPHGYLASNPHAHPYVWGVQHIMPPYGTPPPPHPYVAMYPPGGIYAHPSIPPGSYPFSPFAMPASNGISEAGNIPASMGSDAKIPEVKEKLPIKRSKGNLGGLNMFAGKNNESSKTPRMSTNGIHPKSGESSNEDTSEGSDANSEDDLEYRTGGRRNSLQVYAPQNGGVNSHHRDVVNQPMPISVAGAPGVVPGPTTNLNIGIDYWGAPTSTIPGLHGKVPSTAVAEGMATAGSHDGVQSQHLLQDERELKRQRRKQSNRESARRSRLRKQAECEELAQRADGLKEENASLRSELSRIKSECEQLLSENAALKERLGELPGKEDLGSSRNDENVRDEHQQTEQEEDVKGGH 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1625 398 SMART brlzneu 294 358 IPR004827 GO:0003700|GO:0006355
Alju12g1625 398 MobiDBLite consensus disorder prediction 143 197 - -
Alju12g1625 398 MobiDBLite consensus disorder prediction 1 42 - -
Alju12g1625 398 Coils Coil 307 362 - -
Alju12g1625 398 MobiDBLite consensus disorder prediction 288 303 - -
Alju12g1625 398 MobiDBLite consensus disorder prediction 361 398 - -
Alju12g1625 398 Gene3D - 297 351 - -
Alju12g1625 398 Pfam Disordered region downstream of MFMR 136 260 - -
Alju12g1625 398 MobiDBLite consensus disorder prediction 15 42 - -
Alju12g1625 398 CDD bZIP_plant_GBF1 299 349 IPR045314 GO:0003700|GO:0006355
Alju12g1625 398 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 296 359 IPR004827 GO:0003700|GO:0006355
Alju12g1625 398 Pfam G-box binding protein MFMR 1 98 IPR012900 -
Alju12g1625 398 PANTHER G-BOX-BINDING FACTOR 3-RELATED 10 389 IPR044827 GO:0003700|GO:0006355|GO:0043565
Alju12g1625 398 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 301 316 IPR004827 GO:0003700|GO:0006355
Alju12g1625 398 SUPERFAMILY Leucine zipper domain 297 353 IPR046347 GO:0003700|GO:0006355
Alju12g1625 398 Pfam bZIP transcription factor 294 356 IPR004827 GO:0003700|GO:0006355
Alju12g1625 398 MobiDBLite consensus disorder prediction 362 398 - -
Alju12g1625 398 MobiDBLite consensus disorder prediction 279 320 - -
Alju12g1625 398 MobiDBLite consensus disorder prediction 153 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1625 Alju-ChrAlju12 37552242 37555581 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1625 1 394 bZIP Transcription Factor Family AT2G35530 57.457 2.47e-142 409
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Alju12g1625 MFMR_assoc 1.3e-38 No_clan