Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1623 ATGGGTAGCCGTAAGACGGACAAAGCTTCTAATGACAAGGAGCCTAAGACTCCTGCTACGTCACAGGAGCAGCCTTCAACCACCAGCAGTGGAGCAATAAATCCTGACTGGTCTAGCTTTCAGACATATTCTCCTATACCTCCACATGGATACTTGGCATCAAGTCCGCAAGCCCATCCATATATGTGGGGCGTCCAGCCTATTATGCCTCCCTATGGTACTCCGCCACATCCTTATGTTGCAATGTATCCCCCTGGCGGCATATATACTCATCCAACAATGCCTCCTGTCACAGGATCTTATCCTTTTAGTCCTTTTGCCATGCCTACTTCCAATGGTATTGCTGAGGCTTCAGGAAATACACCTGGCAGCATAGAAGGTGATGCTAGGCCTCCTGAGGTGAAGGAAAAATTGCCGGTGAAAAGATCAAAAGGAAGTTTGGGCAATTTGAATATGATCACAGGGAAGAATAATGAACTTAGCAAAAACCCAGGGACTTCTGCTAATGGAATTCATTCAAAAAGTGGTGAGAGTGCAAGCGAAGATACAAGTGAAGGAAGCGATGCAAATTCTCAAGATGACTCTGAGTTCAAATCAGGAGGCAGGCATAATTCCTTGGAAGCTGAACCACTTCAAAATGGAAGTTCAGTTCTTGCTCCTCAAAACGGGGGAGTTAACACACATCATAAGGGGATTAATCAACCTATGCCTATCTCTGCCGCTGGTGTTCCTGGTCCCACAACAAACCTAAATATCGGAATGGATTACTGGGGAGCATCAACTTCTTCTGCAATTCCTGCAATGCACGGAAAGGTTCCTTCTACTGCAGTTGCTGGGGGAATGGATGAACGAGAAATTAAAAGACAAAGACGGAAGCAGTCTAATAGAGAATCTGCTCGCAGATCCAGGTTGCGCAAGCAGGCAGAGTGCGATGAACTAGCGCAGCGTGCCGAGGCCTTGAAAGAAGAAAATGCTACTCTCCGGTCAGAAGTGAGTCGGATTAAGAGCGAGCACGAACAGTTGCTCTCTGAGAATGCTGCACTCAAGGAGAGACTTGGGGAACTTCCTGAGAAAGAAGATTTTAGGTCAGGCCAGAATGATGAAAATGCAAGTAACGAATCTCAACAGACTGGGCAGGAGGAGGCTGTGAAGGGGGATCAGAAGAGTTGA 1170 0.4684 MGSRKTDKASNDKEPKTPATSQEQPSTTSSGAINPDWSSFQTYSPIPPHGYLASSPQAHPYMWGVQPIMPPYGTPPHPYVAMYPPGGIYTHPTMPPVTGSYPFSPFAMPTSNGIAEASGNTPGSIEGDARPPEVKEKLPVKRSKGSLGNLNMITGKNNELSKNPGTSANGIHSKSGESASEDTSEGSDANSQDDSEFKSGGRHNSLEAEPLQNGSSVLAPQNGGVNTHHKGINQPMPISAAGVPGPTTNLNIGMDYWGASTSSAIPAMHGKVPSTAVAGGMDEREIKRQRRKQSNRESARRSRLRKQAECDELAQRAEALKEENATLRSEVSRIKSEHEQLLSENAALKERLGELPEKEDFRSGQNDENASNESQQTGQEEAVKGDQKS 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1623 389 MobiDBLite consensus disorder prediction 275 309 - -
Alju12g1623 389 MobiDBLite consensus disorder prediction 15 45 - -
Alju12g1623 389 MobiDBLite consensus disorder prediction 147 186 - -
Alju12g1623 389 Coils Coil 303 351 - -
Alju12g1623 389 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 290 305 IPR004827 GO:0003700|GO:0006355
Alju12g1623 389 PANTHER G-BOX-BINDING FACTOR 3-RELATED 15 380 IPR044827 GO:0003700|GO:0006355|GO:0043565
Alju12g1623 389 MobiDBLite consensus disorder prediction 112 240 - -
Alju12g1623 389 MobiDBLite consensus disorder prediction 349 366 - -
Alju12g1623 389 CDD bZIP_plant_GBF1 288 338 IPR045314 GO:0003700|GO:0006355
Alju12g1623 389 Pfam bZIP transcription factor 283 345 IPR004827 GO:0003700|GO:0006355
Alju12g1623 389 MobiDBLite consensus disorder prediction 206 233 - -
Alju12g1623 389 MobiDBLite consensus disorder prediction 1 46 - -
Alju12g1623 389 SUPERFAMILY Leucine zipper domain 286 342 IPR046347 GO:0003700|GO:0006355
Alju12g1623 389 Gene3D - 286 338 - -
Alju12g1623 389 SMART brlzneu 283 347 IPR004827 GO:0003700|GO:0006355
Alju12g1623 389 MobiDBLite consensus disorder prediction 367 382 - -
Alju12g1623 389 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 285 348 IPR004827 GO:0003700|GO:0006355
Alju12g1623 389 MobiDBLite consensus disorder prediction 349 389 - -
Alju12g1623 389 Pfam Disordered region downstream of MFMR 136 266 - -
Alju12g1623 389 Pfam G-box binding protein MFMR 1 95 IPR012900 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1623 Alju-ChrAlju12 37532669 37538606 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1623 1 383 bZIP Transcription Factor Family AT2G35530 58.924 8.54e-153 436
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Alju12g1623 MFMR_assoc 3e-45 No_clan