Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1621 ATGGAGGAAGGATCAGAGCAAGAAAAAGAAGCTCTTCGTCTCAAAGCCATGGCTGAATCCAAATACGAAAGTTCCAACTTCAGCTCCGCTTTGAAATATGCCAAGCGAGCCCAACGCCTTGCTCCTGACCTCGATGGTATCTCCGAAATGGTCACTTCCTTAGACATCCTCAGTGTGGCCTCCAAATCGCCTACTCCAGACTGGTACAAGATACTCCAGGTCGAGCCCTTTGCTCACTCCAACGTCATTCGGAAGCAGTACAAGAAGCTTGCTTTGATTCTTCACCCGGACAAGAATCCCCATGCGGCTTCCGAGGAGGCGTTCAAGCTCGTTGGTGAGGCGTTCCGATTTCTTTCTGATAAAATTCGGAGGAAGGAGTTTGATATGAAGCTGAGGATTCGGATTCAGGATGAGGCGACAGAGAGTTCAGAGCAGCAGTTGGAGACCTTCTGGACGGCGTGCCGCACTTGTCGACTTCTGCATCAGTTTGAGAGGAAGTATGTGGGTCATAATTTGGTTTGCCCTGGTTGTAAAAAGAGTTTCAAGGCTGTGGAGGTTGAGAATGGTAACGAGTCTGAGGAGGAGGCGGAGATGAGGGCTAGGAATAGAAGTAGGAAGTTGAAAGTTGCGAGCCTGACGAAGAAGGTTGATACTGTTGGTAAATCACGGACCGTGAAGGGGAAAGTGAGCGGTGCAGTGAATGAACCTGTGACCACCAAGGATGGTAGATTGAAGGATAAAGTTGGAGGCATTGAAGTGAGAAATGGGGAATTAGAGAGTGAAGGAGCTGTTGGTAAATGGAGTGGGGGAAGACTGAGAAGTGGAGGCTGGAAGAGGAAAATGAGCACTGTTGGGGATGTGTTGGCAAGGTCCAAACCGAAGAAAATTAGAACTCGCGAGGAAACGATGACATTAGTGGAAATGCAGTCTGAAATCAAGAAAAAGGCTCAGAAAAAGAGGAAGATGACATTGAGGGTAAAGGAAAAGGAGGGGGATAGAACAGAGAAGGGGAAAGAGCAGGAGGAATTACTGAAGTCTTTAAAAAGTTCTTGGGGTTCGGTTGCTGTCAAACCAAGAAGTTTGAAGAGCGGGAAGCTAGCAGTTGAGGAGAAGCAAGCATATCTTGCTAAGAGTAAAGAATTGAGAATTGAGAAGCACAGTAACTCTAGCGTATGGGACAAGGAAAATATGGCAGTAGAGGATTCAGATTTTTATGATTTTGATAAAGATAGAGTAGAGAGAAGCTTTAAGAAGGGCCAGGTGTGGGCTGTGTATGATGATGATGATGGAATGCCAAGGAATTATGCTTTGATTGATGAAGTTGTATCAGTGAATCCTTTTGAAGTAAGAATAAGTTGGCTAGATCTACAAAACAGTGGGGATGAAAAGTTAATTGGTTGGGACAAAAGGGGGTTTCATATATCTTGTGGGAGATTTAAAGTTGCCAGGAAGACTTCCATAAATTCTGTAAATATCTTTTCCCATGTTGTAGATTGTGAACGGGCAGCTCGTGAAGTTTACATAATTTATCCAAAGAAGGGGTCTGTTTGGGCACTTTATAATGAGGCAGCCCCTGGTGTGGAGGGAAGAAGTGTTGTAGTTCAGAGCAAGGGGTGCTATGATATCGTCGTATTTTTGACGAGTTATAGTGAAATAACTGGATTAAGCATGGCATATCTGGGGAAAGTCAAAGGTTACAAAACAATATTCAAGAGACAAGAAATGGGGAGTCATGCTATTAGATATCTTGAAAGAGATTATTTCTGGTCAGTTTCACATCAAATTCCTGCACGGAAACTTTCTGGCATTGAAACTCCTGAACTTTTAAGAGACTCTTGGGAACTTGATCCTGCTTCACTTCCTTCAGATTTACTTGGGCTTAATTAG 1887 0.4414 MEEGSEQEKEALRLKAMAESKYESSNFSSALKYAKRAQRLAPDLDGISEMVTSLDILSVASKSPTPDWYKILQVEPFAHSNVIRKQYKKLALILHPDKNPHAASEEAFKLVGEAFRFLSDKIRRKEFDMKLRIRIQDEATESSEQQLETFWTACRTCRLLHQFERKYVGHNLVCPGCKKSFKAVEVENGNESEEEAEMRARNRSRKLKVASLTKKVDTVGKSRTVKGKVSGAVNEPVTTKDGRLKDKVGGIEVRNGELESEGAVGKWSGGRLRSGGWKRKMSTVGDVLARSKPKKIRTREETMTLVEMQSEIKKKAQKKRKMTLRVKEKEGDRTEKGKEQEELLKSLKSSWGSVAVKPRSLKSGKLAVEEKQAYLAKSKELRIEKHSNSSVWDKENMAVEDSDFYDFDKDRVERSFKKGQVWAVYDDDDGMPRNYALIDEVVSVNPFEVRISWLDLQNSGDEKLIGWDKRGFHISCGRFKVARKTSINSVNIFSHVVDCERAAREVYIIYPKKGSVWALYNEAAPGVEGRSVVVQSKGCYDIVVFLTSYSEITGLSMAYLGKVKGYKTIFKRQEMGSHAIRYLERDYFWSVSHQIPARKLSGIETPELLRDSWELDPASLPSDLLGLN 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1621 628 CDD DnaJ 67 120 IPR001623 -
Alju12g1621 628 SUPERFAMILY Chaperone J-domain 62 132 IPR036869 -
Alju12g1621 628 Pfam DnaJ domain 67 128 IPR001623 -
Alju12g1621 628 PRINTS DnaJ domain signature 69 87 IPR001623 -
Alju12g1621 628 PRINTS DnaJ domain signature 87 102 IPR001623 -
Alju12g1621 628 PRINTS DnaJ domain signature 103 123 IPR001623 -
Alju12g1621 628 Gene3D DnaJ domain 56 156 IPR036869 -
Alju12g1621 628 SMART dnaj_3 66 123 IPR001623 -
Alju12g1621 628 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Alju12g1621 628 PANTHER BNAC03G44070D PROTEIN 6 621 - -
Alju12g1621 628 MobiDBLite consensus disorder prediction 323 340 - -
Alju12g1621 628 MobiDBLite consensus disorder prediction 314 340 - -
Alju12g1621 628 Pfam Domain of unknown function (DUF3444) 395 602 IPR024593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1621 Alju-ChrAlju12 37528961 37530847 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1621 1 186 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 31.863 1.00e-29 119