Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1610 ATGGAGCTATTTCCGGCACAGCCAGATTTGTCTTTGCAGATTAGTCCTCCCAACACGAAACCCTCACCAGGATGGAGAAATAGTGGCTCACATCAAGAGCATCAGCTTGATTTGGGGTTTTGGAAGAGAGCTTTGGAGACCAGAACCTCATTGCTCTCTTCAATGCCTAAAACTAGTACTGACTTTTTTGACCTTTCACTCTCCAATACTCCCAATAACCCTTCAGTTTCAGTTTCTTCCTCAGATCATCACCATCTTCATCTTTCTCACCGCTTCCAAAACGCTCCGTTTCAACAACACCCTCAAGACCTCGGATTTCTCAGACCCATCCGAGGAATCCCGGTGTACCAGAACCTTCCTCATCCTCATCCTCTTCCTCCTTTCTCGCAGGTTCAGAATATGGATGCTTCTATTATTTCTTCATCTACCATCAACAACACGACCACCTGCACAAGCTCTTCCTCGACCCCTTTTCCTTATCATAGTCGTAGTCATAGTCATAGTCAGGGTCTGATGAGGTCGAGGTTCTTGCCTCATCGTTTCCCTGCAAAGCGCAGCATGAGAGCTCCCAGGATGCGTTGGACTACCACCCTCCATGCTCGCTTTGTTCATGCCGTTGAGCTTTTGGGTGGCCACGAAAGGGCTACACCCAAATCCGTTCTGGAGCTAATGGATGTCAAGGATCTCACTTTAGCCCACGTTAAATCCCATTTACAGATGTATCGGACGGTGAAAACCACAGATAGAACAGCAGCAGCTTCTTCTACAGGCCAATCAGACGGATATGATAATGGATCATCTGGGGATACTTCTGAAGAATTAATATTTGACATGAACAATCCTAGGCACGGAAGACAAAGTTTTCATCAAGAAAAGGAATATCATGGCCTCTGGAGCAACTCTTCCAGAGAAGCTTGGTTGCATGGGAAGCCAAAGGAGACTGATTCTGTTGGAAACAACAATGTTAGTTCTCTTGAGAAAGAGAGAGTATCAGAGGGAAGCTCATCGTCAAACATTTCAGGATCAAGCCCTAAGAAGCCTAATCTTGATTTGGAGTTCAGTTTGGGACAACCAATATGA 1080 0.4574 MELFPAQPDLSLQISPPNTKPSPGWRNSGSHQEHQLDLGFWKRALETRTSLLSSMPKTSTDFFDLSLSNTPNNPSVSVSSSDHHHLHLSHRFQNAPFQQHPQDLGFLRPIRGIPVYQNLPHPHPLPPFSQVQNMDASIISSSTINNTTTCTSSSSTPFPYHSRSHSHSQGLMRSRFLPHRFPAKRSMRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRTAAASSTGQSDGYDNGSSGDTSEELIFDMNNPRHGRQSFHQEKEYHGLWSNSSREAWLHGKPKETDSVGNNNVSSLEKERVSEGSSSSNISGSSPKKPNLDLEFSLGQPI 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1610 359 MobiDBLite consensus disorder prediction 11 31 - -
Alju12g1610 359 MobiDBLite consensus disorder prediction 150 169 - -
Alju12g1610 359 MobiDBLite consensus disorder prediction 314 347 - -
Alju12g1610 359 MobiDBLite consensus disorder prediction 247 274 - -
Alju12g1610 359 SUPERFAMILY Homeodomain-like 187 243 IPR009057 -
Alju12g1610 359 Pfam Myb-like DNA-binding domain 191 242 IPR001005 -
Alju12g1610 359 MobiDBLite consensus disorder prediction 1 31 - -
Alju12g1610 359 Gene3D - 189 246 - -
Alju12g1610 359 MobiDBLite consensus disorder prediction 247 275 - -
Alju12g1610 359 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 8 358 IPR044847 GO:0000976|GO:0006355|GO:0010158
Alju12g1610 359 NCBIfam myb-like DNA-binding domain, SHAQKYF class 190 243 IPR006447 GO:0003677
Alju12g1610 359 FunFam Myb family transcription factor 188 246 - -
Alju12g1610 359 MobiDBLite consensus disorder prediction 309 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1610 Alju-ChrAlju12 37390195 37394175 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1610 1 358 G2-like Transcription Factor Family AT4G17695 39.523 4.72e-59 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Alju12g1610 Myb_DNA-binding 1.7e-05 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju12g1610 12 37390195 37394175 Alju12g1610 12 37390195 37394175 ECH