Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1594 ATGGTTCCTTCATTACCCACATTCACTTCACAAACCCACCCCCTTGTCTTTAATTCCCTCCTCCTTCTTCTTCCTCTCTCACATTCACTATCTCTAGCTTCTACTTCTTCCTCATTTTTGCCATCAACCTTCTCTCTCTCTCTCTCTTCCCTTTCTGGGCCCAAAAGAAAAAAAAAAGCCAGCACCACCACCATGGATGATCCCAAGGAAGGAGATCCTCAGAGAAAAAAGCAGCAGCAAAAAGTTTCCTTGTTAAAGCTCTTCTCTTTCGCTGACTTTTATGATTATCTTCTCATGGCTCTTGGATCTATTGGCGCTCTTGTTCATGGGGCTTCAGTTCCTGTTTTCTTCATCTTTTTCGGAAAGTTGATCAACATCATTGGCTTGGCTTATCTTTTCCCTAAAGAAGCTTCTCACAAAGTTGCTCAGTATTCATTGGATTTCGTGTACCTGAGTGTAGCAATACTATTTTCTTCTTGGACAGAGGTGGCATGTTGGATGCATACAGGAGAAAGGCAAGCTGCGAAAATGAGAATGGCGTATTTAAGGTCAATGCTGAGTCAAGATATTAGTCTGTTTGACACTGAGGCTTCCACCGGAGAGGTCATTTCTGCTATTACCAGTGACATTATTGTTGTCCAAGATGCTTTATCTGAGAAGGTAGGGAATTTCATCCACTACATTAGCAGATTCATATCGGGATTCATTATTGGATTCGTGAGAGTGTGGCAGATTAGTTTAGTGACACTCTCCATTGTCCCCTTAATCGCCCTCGCTGGAGGTCTCTACGCTTATGTCACAATTGGCCTAATCGCCAAAGCTCGAAAATCCTACGTCAGAGCTGGTGAAATAGCTGAAGAAGTGATAGGCAATGTTAGAACAGTACAGGCATTCGCAGGAGAAGAAAGAGCAGTAAGATCATACAAAACGGCCCTAATGAACACTTACAAGAATGGTCGAAAAACAGGATTAGCGAAGGGTTTAGGACTTGGTTCTATGCATTGTGTTCTATTTCTTTCATGGTCCCTGCTTGTTTGGTTCACTAGCGTCGTTGTTCACAAAGATATCGCCAATGGTGGAGAGTCCTTCACCACCATGCTCAACGTTGTCATCGCCGGCCTGTCACTTGGACAGGCAGCACCAGATATCACTGCATTTGCACGAGCAAAGGCAGCTGCTTATCCCATTTTTCAGATGATAGAGAGGGACACAGTGAGCAAAAGCAGCTCAAAAACTGGTTACAAATTAAACAAAGTAGAGGGTCACATTCAATTCAAAGGCGTTTGCTTCAGTTACCCATCTCGCCCTGAAGTAGTCATCTTCAACAACCTTAATATTGACATTCCTTCAGGCAAAGTTGTGGCCCTTGTTGGGGGAAGTGGTTCTGGAAAGAGCACTGTTATATCACTGATTGAACGCTTCTACGAACCCTTTTCTGGGCAGATCCTATTGGATGGGAATAACATCAAGGAACTTGATCTTAAATGGCTAAGGCGACAAATTGGGTTGGTTAATCAAGAACCTGCCCTTTTTGCTACAAGCATCAGGGAGAACATACTGTATGGAAAAGATGATGCCACTCTTGAAGAACTTCAACGAGCTGCGAAGCTTTCAGATGCTCAGTCTTTCATTAACAATCTTCCTGATAGATTAGAAACTCAGGTTGGTGAGAGAGGGATACAACTATCAGGAGGACAAAAGCAAAGGATTGCAATATCTCGTGCTTTGGTGAAGAATCCATCTATCCTTTTATTGGATGAAGCAACCAGTGCCCTGGATGCAGAGTCAGAGAAGAGTGTACAGGAGGCTCTTGATCGTGTCATGTTGGGTCGAACAACTGTGGTAGTAGCACACAGACTTTCTACAATCAGAAACGCAGATGTGATTGCGGTTGTTCAAGGAGGCAAGATTGTTGAAACTGGCAGCCATGATGAGCTCATCGCCAATCCAAATAGTGCATATGCATCCCTTGTTCAACTCCAAGAGGCAGCTTCTTTGCAAACACACCCTTCAGTGGGTCCTAGCTTAGGACAGATTTCAAGCGTAAGGTACTCAAGAGAATTATCCCGTACAACGACAAGCTTAGGTGGTAGTTTTCGATCAGATAAAGAATCTATTGGCTGTGTTGATGCTGACGAAGTGGATAGTGGCAAGACAAGGCGTGTTTCCTCAAGAAGATTATACTCCATGATAGGACCTGATTGGTACTATGGGGTTATAGGGACTTTCTGTGCATTTATTGCTGGAGCCCAGATGCCTCTTTTTGCTCTAGGAATATCTCATGCTCTGGTTTCATATTACATGGACTGGGAAACTACCTGCCGTGAGGTCAAGAAAATTGCCTTCCTCTTTTGTGGGGCAGCAGTTGTAACCGTCATTGTCCATGCCATTGAACACCTTTGTTTTGGAATCATGGGTGAGAGACTTACTCTTCGTGTCCGAGAAGCTTTGTTTTCTGCTATTTTGAAGAATGAAATTGGCTGGTTCGATGATACAGACAACACAAGTTCTATGCTTTCATCACGTCTAGAGACCGATGCAACTTTGTTGCGAACTATAGTTGTTGATCGGTCTACAATTCTCTTACAGAATGTTGGTCTGGTTGTTGCTTCATTTATTATTGCCTTCTTGTTGAACTGGAGAATAACCCTTGTTGTCGTTGCCACTTATCCTTTGGTCATTAGTGGTCACATTAGTGAGAAACTTTTCTTTCAAGGATACGGTGGCAACTTGAGCAAAGCATATCTAAAGGCCAACATGCTGGCTGGGGAGGCTGTGAGTAACATACGCACTGTTGCTGCATTTTGTTCTGAAGATAAAGTCCTAAAACTTTATGCCAGCGAGCTTGTTGATCCTTCCAAGCGTTCGTTAAAACGGGGTCAAATTGCAGGCATATTCTATGGCATTTCCCAGTTCTTTATTTTCTCATCTTATGGCCTTGCCTTGTGGTATGGTTCTGTACTGATGGAAAAGGAGCTTGCCAGCTTTAAATCAATCATGAAGTCGTTTATGGTTTTGATAGTAACAGCACTGGCCATGGGGGAGACTCTGGCTCTGGCTCCAGACCTCTTGAAGGGGAATCAAATGGTTGCATCAGTTTTTCATCTGATGGATAGAAAGTCAGGAGTAATGAGTGATACTGGAGAAGATCTAAAGACAGTAGAGGGAACTATTGAGCTTAAAAATGTCAATTTCAGCTACCCTTCAAGGCCAGATGTGATCATTTTTAAGGATTTTAATCTTAAAGTGCCTTCAGGCACTAGTCACGCCTTAGTGGGCCAAAGTGGTTCTGGTAAAAGTTCTGTTGTCTCCCTTATCCTCAGGTTTTATGATCCAACTTTTGGGAAGGTGATGATTGACGGGAAGGACATAAGGAGAGTGAATCTGAAATCACTGAGGAAACACATTGGTCTGGTGCAACAAGAACCAGCTCTATTTGCAACATCAATATTTGAAAACATTCTATATGGAAAGGAAGGAGCCTCAGAATCAGAAGTAATTGCAGCAGCTCAACTGGCAAACGCTCACAGCTTCATAAGTGGTCTTCCTGAGGGTTACTCGACCAACGTGGGCGAGCGAGGAGTTCAGCTATCGGGTGGCCAGAGACAGAGGATAGCCATAGCCAGAGCTGTTTTAAAGAACCCAGAAATATTGCTTCTTGATGAAGCTACAAGTGCACTTGATGTTGAATCAGAGCGTGTGGTTCAGCAAGCACTGGACAGGTTGATGCAGAACAGAACAACACTGATGGTGGCACATAGACTGTCCACAATAAGAAATGCAGATCAGATATCAGTTTTGCAGGATGGGAAGATTGTGGAACAAGGGTCTCATTCAAGTCTTATAGAGAACAAAATTGGAGCATACTTTAAATTAATCAACCTTCAACAGCAACAGAATCAACAATAA 3909 0.4318 MVPSLPTFTSQTHPLVFNSLLLLLPLSHSLSLASTSSSFLPSTFSLSLSSLSGPKRKKKASTTTMDDPKEGDPQRKKQQQKVSLLKLFSFADFYDYLLMALGSIGALVHGASVPVFFIFFGKLINIIGLAYLFPKEASHKVAQYSLDFVYLSVAILFSSWTEVACWMHTGERQAAKMRMAYLRSMLSQDISLFDTEASTGEVISAITSDIIVVQDALSEKVGNFIHYISRFISGFIIGFVRVWQISLVTLSIVPLIALAGGLYAYVTIGLIAKARKSYVRAGEIAEEVIGNVRTVQAFAGEERAVRSYKTALMNTYKNGRKTGLAKGLGLGSMHCVLFLSWSLLVWFTSVVVHKDIANGGESFTTMLNVVIAGLSLGQAAPDITAFARAKAAAYPIFQMIERDTVSKSSSKTGYKLNKVEGHIQFKGVCFSYPSRPEVVIFNNLNIDIPSGKVVALVGGSGSGKSTVISLIERFYEPFSGQILLDGNNIKELDLKWLRRQIGLVNQEPALFATSIRENILYGKDDATLEELQRAAKLSDAQSFINNLPDRLETQVGERGIQLSGGQKQRIAISRALVKNPSILLLDEATSALDAESEKSVQEALDRVMLGRTTVVVAHRLSTIRNADVIAVVQGGKIVETGSHDELIANPNSAYASLVQLQEAASLQTHPSVGPSLGQISSVRYSRELSRTTTSLGGSFRSDKESIGCVDADEVDSGKTRRVSSRRLYSMIGPDWYYGVIGTFCAFIAGAQMPLFALGISHALVSYYMDWETTCREVKKIAFLFCGAAVVTVIVHAIEHLCFGIMGERLTLRVREALFSAILKNEIGWFDDTDNTSSMLSSRLETDATLLRTIVVDRSTILLQNVGLVVASFIIAFLLNWRITLVVVATYPLVISGHISEKLFFQGYGGNLSKAYLKANMLAGEAVSNIRTVAAFCSEDKVLKLYASELVDPSKRSLKRGQIAGIFYGISQFFIFSSYGLALWYGSVLMEKELASFKSIMKSFMVLIVTALAMGETLALAPDLLKGNQMVASVFHLMDRKSGVMSDTGEDLKTVEGTIELKNVNFSYPSRPDVIIFKDFNLKVPSGTSHALVGQSGSGKSSVVSLILRFYDPTFGKVMIDGKDIRRVNLKSLRKHIGLVQQEPALFATSIFENILYGKEGASESEVIAAAQLANAHSFISGLPEGYSTNVGERGVQLSGGQRQRIAIARAVLKNPEILLLDEATSALDVESERVVQQALDRLMQNRTTLMVAHRLSTIRNADQISVLQDGKIVEQGSHSSLIENKIGAYFKLINLQQQQNQQ 1302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1594 1302 SUPERFAMILY ABC transporter transmembrane region 725 1039 IPR036640 GO:0005524|GO:0016020
Alju12g1594 1302 Gene3D ABC transporter type 1, transmembrane domain 86 1027 IPR036640 GO:0005524|GO:0016020
Alju12g1594 1302 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 100 388 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju12g1594 1302 FunFam ABC transporter B family member 4 1048 1301 - -
Alju12g1594 1302 FunFam ABC transporter B family member 4 413 668 - -
Alju12g1594 1302 CDD ABC_MTABC3_MDL1_MDL2 423 661 - -
Alju12g1594 1302 MobiDBLite consensus disorder prediction 59 78 - -
Alju12g1594 1302 Pfam ABC transporter transmembrane region 101 371 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju12g1594 1302 Pfam ABC transporter transmembrane region 740 1011 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju12g1594 1302 SMART AAA_5 1085 1271 IPR003593 GO:0016887
Alju12g1594 1302 SMART AAA_5 450 636 IPR003593 GO:0016887
Alju12g1594 1302 SUPERFAMILY ABC transporter transmembrane region 87 393 IPR036640 GO:0005524|GO:0016020
Alju12g1594 1302 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 414 661 IPR027417 -
Alju12g1594 1302 Pfam ABC transporter 1077 1225 IPR003439 GO:0005524
Alju12g1594 1302 CDD ABC_6TM_Pgp_ABCB1_D2_like 728 1041 - -
Alju12g1594 1302 CDD ABC_6TM_Pgp_ABCB1_D1_like 99 384 - -
Alju12g1594 1302 PANTHER ABC TRANSPORTER B FAMILY 56 665 IPR039421 -
Alju12g1594 1302 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 739 1025 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju12g1594 1302 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1051 1296 IPR027417 -
Alju12g1594 1302 Pfam ABC transporter 442 590 IPR003439 GO:0005524
Alju12g1594 1302 ProSitePatterns ABC transporters family signature. 562 576 IPR017871 GO:0005524|GO:0016887
Alju12g1594 1302 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1058 1294 IPR003439 GO:0005524
Alju12g1594 1302 Gene3D - 1048 1302 IPR027417 -
Alju12g1594 1302 Gene3D - 413 662 IPR027417 -
Alju12g1594 1302 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 423 659 IPR003439 GO:0005524
Alju12g1594 1302 CDD ABC_MTABC3_MDL1_MDL2 1058 1295 - -
Alju12g1594 1302 ProSitePatterns ABC transporters family signature. 1197 1211 IPR017871 GO:0005524|GO:0016887
Alju12g1594 1302 MobiDBLite consensus disorder prediction 50 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1594 Alju-ChrAlju12 37253839 37261606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1594 62 1302 Calmodulin-binding Proteins AT2G36910 49.723 0.0 1218