Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1567 ATGCATTTGCTTTGCATTTTACTGCGAAAAAACTGCGTTTGTGTGTATAGTTGGACCCTGATGTCTCCACCAGTTCTGACTGCTCAGGAGGAAGGGCAGAGCAACAACTCAACAATAACTTCTTCACGATCTGAGGATCGTATCTCCCAAAATGTGACTGGATTAAAAGAACGCAATTACCTCGGATTATCAGAATGTTCATCAGTGGACAGCTCTACTGTTCCAAGCGACCCAGATGAAAAAAGGGACAATCTGAATTTGAAGGCTACAGAATTGAGGTTGGGTCTTCCTGGATCCCAATCACCTGAAAGGGATGATAGCTCAACAAAATTTGATGAGAAGCCACTGTTTCCCTTGCTTCCTACAAAAGATGGAATCTGCTCATTGTCCCAGAAAATTGTGATTACAGGCAACAAAAGGGGATTCTCTGACACCATGGATGGGTTCCCTGAGGGGAAGTTTCCCGGGAATTCTGGGGTAAATGTGCTGCTGTCTCCTAGATCTGCTAGAGCTCAACTAACCACAACAAAAGAAATGCCAACTAAAGTGTTGCAAGAACGGCCATGTGCTACTAATGGAACAGGCCATAACAAAACGGATGCTTCTATTGGTGGTAGTGCTCCTTCCTCTAAGGCACAGGTTGTTGGTTGGCCTCCAATAAGATCATTTAGGAAGAACTCGTTGGCTGTCACTTCAAAGAACAATGACGAAGTAGATGGTAAACTGAGTCCTGCTGCTCTCTTTGTGAAGGTGAGCATGGATGGAGCTCCCTATCTAAGGAAGGTTGACCTTAGGAGTTACAATGCATACCAGGATCTGTCTTCTGCCCTTGAGAAGATGTTCAGCTGTTTTACCCTAGGTCAATGTGGTTCCCACGGAGCTCCAGGAAGAGAAATGTTGAGTGAGAGCAAGCTAAGGGACCTTCTGCATGGTTCAGAATATGTACTCACTTACGAAGATAAAGATGGTGATTGGATGCTTGTTGGGGATGTACCATGGGAGATGTTTATTGACACATGCAAGAGGCTGAAAATCATGAAAGGTTCTGATGCTATTGGCTTAGCTCCTAGGGCTATGGAGAAATCCAAGATCAGGTGCTAG 1101 0.4478 MHLLCILLRKNCVCVYSWTLMSPPVLTAQEEGQSNNSTITSSRSEDRISQNVTGLKERNYLGLSECSSVDSSTVPSDPDEKRDNLNLKATELRLGLPGSQSPERDDSSTKFDEKPLFPLLPTKDGICSLSQKIVITGNKRGFSDTMDGFPEGKFPGNSGVNVLLSPRSARAQLTTTKEMPTKVLQERPCATNGTGHNKTDASIGGSAPSSKAQVVGWPPIRSFRKNSLAVTSKNNDEVDGKLSPAALFVKVSMDGAPYLRKVDLRSYNAYQDLSSALEKMFSCFTLGQCGSHGAPGREMLSESKLRDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDTCKRLKIMKGSDAIGLAPRAMEKSKIRC 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1567 366 MobiDBLite consensus disorder prediction 90 114 - -
Alju12g1567 366 MobiDBLite consensus disorder prediction 188 213 - -
Alju12g1567 366 Gene3D - 242 359 - -
Alju12g1567 366 MobiDBLite consensus disorder prediction 188 209 - -
Alju12g1567 366 MobiDBLite consensus disorder prediction 29 49 - -
Alju12g1567 366 Pfam AUX/IAA family 90 357 IPR033389 -
Alju12g1567 366 ProSiteProfiles PB1 domain profile. 246 350 IPR000270 GO:0005515
Alju12g1567 366 SUPERFAMILY CAD & PB1 domains 244 347 - -
Alju12g1567 366 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 85 353 IPR003311 GO:0005634|GO:0006355
Alju12g1567 366 FunFam Auxin-responsive protein 241 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1567 Alju-ChrAlju12 36986976 36990858 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1567 250 356 B3 DNA Binding Superfamily AT4G23980 28.972 1.41e-07 51.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Alju12g1567 AUX_IAA 2.7e-89 CL0072