Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1561 ATGGAGGAGAAATTTGATATTTGGATATTCAGATTTGTTCTGGTATATGCCCTTTGCATTTTTGTGTTCACCAGATCATCTTCTGCAAGTGAAGGATTTGTAAGCATAGCTTGTTGTGCTGATTCAACATATACAGATCCAGAGACCAACTTGAGTTACAAATCAGATTACACTTGGTTTCCAGATAGAACAAGCTGCATAAGCTTGACCAATCATAAGGCAAACCAAACAGGCAACCAAAGAGCAAGAGTGTTTGATATTAGAGATAAGGGAAAGAGATGTTACAACTTGCCAACAATTCAGGACAAAGTGTATATGTTAAGGGGCTCATTTCCATCTGACAATTCACTTGGGAATTTTTCTTTTAATGTGTCAATTGCAGTAACATCATTAGGTTCAGTAAGACCATCCCAGGACTTGGAAATACTTGAGGAAGTTTTCAGAGCTTATAAGAACTCCATAGACTTTTGCTTAGTGAAGGAGGAGCAGGAAGATGGGAATCCTTATATTTCACAGATCGATTTAAGGCCTTCGCATGAAGAGTATCTGCAGGATTTACCTTCTAGTGTTCTAAAATTGATCAGTAGAAATAATCCAGGGGGCACAGTAAGTGGCATCAGGTACCCAATAGACTCAAATGACCGAATCTGGAAAGAAACTTCAATCTCATCAGCATCTCCCATATCATCATTCAATGTCAGCATTTCTGGCCAAATATCTAATGTGACTCCTCCTCTTCAAGTTTTACAAACTGCTCTTACACATTCTGAGAGATTAGAGTTCATTCACAATATCTCAGAAACATGGAACCATGTCTACCGCGTGTTCCTCTACTTCCTTGAATTAAGCAATACTGTTAGGTCAGGCCAAAGAGTGTTTGACATCTATCTTAATGGTGACCTTAAAGAGAAGAGTTTTGATATTATGGCTGGAGGCTCCAACTATAGACACACAGTGCTGAACGTTTCGTCAAATGGTGTAATCAATTTAACCTTGGCCAAAGAATCTAGTTCTGAGTATGGACCACTTTGTAATGCATATGAAATCCTGGAGGTACTTCCATGGAAGAAAGAGACCAATCAAACTGACTTGCAAGAAATGCAGAAGGTGGCAGAAGAGTTGATGATGCAAAACCAAGGCAATAAAGTGCTACAGAGTTGGAGTGGTGATCCATGCATGCCTTTTCCTTGGAATGGAGTAGAATGTGATCTTTTGAATGATTCGACTGTTATCAATAAGCTGGATCTTTCTTCAAGTAATCTCAGAGGACCAATTCCTTCTGGGGTCACTGCGTTGACCAACTTAGAAACATTGAACCTGAGTCACAATAACTTCAATGGAAGTGTCCCTCAATTTCCACCTTCCTCTTCGCTGATATCACTAGATCTGAGCTACAATGATCTCGCGGGATCGCTTCAGGGATCAATTGCCTCACTGCCACATCTAAAATCCTTATATTTCGGCTGCAATCCTGACATGAGCAAGGAGGTCCCATCAAACTTCAACAGTTCACTCAATACAGATTATGGAAGATGCAACTATAAAAGATCAAGAATTTCAGCACCACTCATCATTGGAACTGTTACATGTGGGTCGATCTTGCTTACATTGGCTCTTGGATTTCTTTTTGCTTGCCATTATAAGAAACTATCAATTCCCTGGGGAGGATTTGTTGATCAGAAATACCCTAACCCAATGGCAGCAAATATCATCTTCTCTTTGCCCAGTAAAGACGATTTCTTCATGAAGTCAGCATGTATTCAAAAATTTACCCTGGATTATATAGAGGCAGCCACGGAGAAGTACAAAACATTAATAGGTGAAGGAGGGTTTGGCTGTGTCTACAGGGGCATTCTAGATGATGGTCAAGAAGTGGCAATGAAAGTCCGGTCAGCCACATCAACTCAGGGAACTAAGGAATTTGACAATGAGCTAAATCTGCTTTCAGAGATACAGCACGAAAATTTGGTGCCTCTTCTTGGTTACTGTAGTGAAAATGATCAACAAATTCTGGTGTACCCCTTTATGTCCAACGGCTCTTTACAGGATAGACTTTATGGAGAACCATCAAAGAGAAAAGTATTAGACTGGCCAACCAGACTTTCAATTGTTCTGGGTGCAGCTAGAGGTTTGGCATATCTTCATACATTTCCAGGGTGTTCCATTATACATAGGGATGTAAAATCTAGCAATATACTTCTGGATCATAGCATGACAGCTAAAGTAGCAGATTTTGGTTTCTCAAAATATGCTCCTCAGGAAGGAGACATCAGTGCTTCTCTTGAACTAAGAGGAACAGCAGGATATCTGGATCCCGAGTACTATACTACCCAGCAGTTATCTGCAAAAAGTGATGTCTTCAGTTTCGGGGTGGTTCTACTTGAAATCATAAGTGGTCGAGAACCTCTCAACATCCAAAGGCCACGCAACGAGTGGAGCCTAGTCGAATGGGCTAAAGCATATATAAGAGCAGCAAAAATTGATGAAATAGTGGATCCAGGCATAAAAGGAGGATATCATGCAGAGGCAATGTGGAGAGTGGTGGAAGTAGCACATTCTTGTGTTGAAACATGCTCAAGATTCAGACCTGAGATCGAGGATGTTGTGAGAGAATTGGAGGATGCTCTAATTATAGAGAACAATGCATCAGAATATATGAAGTCTATAGAGAGCCTTGGAGGCTCCAATCGCTATTCCATTGTGATAGACAAAAAGATGTTACCACCATCTTCTTCATCTACAACAGAATCAACTAAATCAAACCATGTCCTTCCCACAGCCTAG 2784 0.4052 MEEKFDIWIFRFVLVYALCIFVFTRSSSASEGFVSIACCADSTYTDPETNLSYKSDYTWFPDRTSCISLTNHKANQTGNQRARVFDIRDKGKRCYNLPTIQDKVYMLRGSFPSDNSLGNFSFNVSIAVTSLGSVRPSQDLEILEEVFRAYKNSIDFCLVKEEQEDGNPYISQIDLRPSHEEYLQDLPSSVLKLISRNNPGGTVSGIRYPIDSNDRIWKETSISSASPISSFNVSISGQISNVTPPLQVLQTALTHSERLEFIHNISETWNHVYRVFLYFLELSNTVRSGQRVFDIYLNGDLKEKSFDIMAGGSNYRHTVLNVSSNGVINLTLAKESSSEYGPLCNAYEILEVLPWKKETNQTDLQEMQKVAEELMMQNQGNKVLQSWSGDPCMPFPWNGVECDLLNDSTVINKLDLSSSNLRGPIPSGVTALTNLETLNLSHNNFNGSVPQFPPSSSLISLDLSYNDLAGSLQGSIASLPHLKSLYFGCNPDMSKEVPSNFNSSLNTDYGRCNYKRSRISAPLIIGTVTCGSILLTLALGFLFACHYKKLSIPWGGFVDQKYPNPMAANIIFSLPSKDDFFMKSACIQKFTLDYIEAATEKYKTLIGEGGFGCVYRGILDDGQEVAMKVRSATSTQGTKEFDNELNLLSEIQHENLVPLLGYCSENDQQILVYPFMSNGSLQDRLYGEPSKRKVLDWPTRLSIVLGAARGLAYLHTFPGCSIIHRDVKSSNILLDHSMTAKVADFGFSKYAPQEGDISASLELRGTAGYLDPEYYTTQQLSAKSDVFSFGVVLLEIISGREPLNIQRPRNEWSLVEWAKAYIRAAKIDEIVDPGIKGGYHAEAMWRVVEVAHSCVETCSRFRPEIEDVVRELEDALIIENNASEYMKSIESLGGSNRYSIVIDKKMLPPSSSSTTESTKSNHVLPTA 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1561 927 ProSiteProfiles Protein kinase domain profile. 600 877 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g1561 927 MobiDBLite consensus disorder prediction 908 927 - -
Alju12g1561 927 Gene3D - 193 352 - -
Alju12g1561 927 SMART serkin_6 600 877 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g1561 927 Gene3D Phosphorylase Kinase; domain 1 573 675 - -
Alju12g1561 927 PANTHER OS07G0107800 PROTEIN-RELATED 34 876 - -
Alju12g1561 927 ProSitePatterns Protein kinases ATP-binding region signature. 606 628 IPR017441 GO:0005524
Alju12g1561 927 Gene3D Ribonuclease Inhibitor 364 520 IPR032675 -
Alju12g1561 927 Gene3D Transferase(Phosphotransferase) domain 1 676 889 - -
Alju12g1561 927 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 676 885 - -
Alju12g1561 927 FunFam receptor-like protein kinase FERONIA 574 675 - -
Alju12g1561 927 SUPERFAMILY L domain-like 383 501 - -
Alju12g1561 927 Pfam Protein tyrosine and serine/threonine kinase 603 872 IPR001245 GO:0004672|GO:0006468
Alju12g1561 927 Pfam Malectin-like domain 40 351 IPR024788 -
Alju12g1561 927 ProSitePatterns Serine/Threonine protein kinases active-site signature. 722 734 IPR008271 GO:0004672|GO:0006468
Alju12g1561 927 CDD STKc_IRAK 606 873 - -
Alju12g1561 927 SUPERFAMILY Protein kinase-like (PK-like) 581 872 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1561 Alju-ChrAlju12 36897185 36903691 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1561 19 879 Receptor kinase-like Gene Family AT1G67720 33.147 2.68e-129 410
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Alju12g1561 Malectin_like 2.2e-47 CL0202