Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1557 ATGGCCAATACTTTCTGCTATTCCCATCTCCTTCTTCCTCTGTTATTCTCCTTCTCCTCCTTGTTTCTTTCTGTGAATTCACTTTACTTTCAAAAGTTTGGATTTGCCTCTAATGAAGCCGACATTCTCTACATGGGATCTGCAGGATCTCTAGTTGGTACTGTTCGATTCAACTTGAATGATAAGTATACTTGTCAAGTAGGATGGGCTATGTATGCTAGAAGGGTAAAACTTTGGGACTCAAGTACTGGACACATCACTGACTTCACTTCTCATTATACTTTCACAATAGACACTCAAGGTAAAACTACTTATGGCCATGGACTTTGCTTCTTCCTCGCTCCTTTTGGTTTTGAAATCCCTCCAAATTCTGCTAGTGGCTTTCTAGGCCTATTCAATACCACAACTAGTCTTTCATCTCAGAGCCAGATTGTTCATGTGGAGTTTGACTCTTACCCAAATTCTGAATGGGGTGAGACCACAGAACATGTGGGAATCAACAATCATTCTGTTGTTTCATCAGTGTCTACGTTTTGGAATACTAGCCTACACAGTGATGATGTTGCAGATGTGTGGATCACCTACAACTCTGCATCGAAGAACTTGAGTGTAACATGGAAATATCAGAGCACACCGAGTCCTCAAGAGAACAATAGTCTTTCTTATCTAATTGATTTATCCAAGGCTTTGCCTGAATGGGTTACAGTTGGATTTTCTGCTGCAACAGGATCGGTTGGAGAACTTCATACTCTTCTCTCTTGGGAGTTCAACTCAACTTTGGATGATACTGAACAAGGCAAAAACAAGGCAACACTTATAGTGGTTCTGAGCACTGTTTTAGGGAGTATTGTTTTGATAGTTGGAGGAGCAATAGTAGCATATGCATTACTCAGGAGGAAGAAGAAAATGAAAAGCAAAAAGGAAGAAGGCGTGAACTTAACATCAATGAATGATGATCTTGAAAGAGGGGCAGGACCAAGAAGATTCTCTCACAGAGAGCTTGCTAAAGCTACCAATAATTTCTCCAAGGACAGGAAACTTGGTCAAGGTGGGTTTGGAGCTGTTTACAGAGGTTATTTTCCTCATATGGACTTAACCGTTGCGGTGAAGAAAATATCAAAAGGATCAAGGCAAGGGAAAAAAGAGTATGTAACCGAGGTTAAGATCATTAGTCAGCTAAGACACAGGAATCTTGTGCAGCTAATCGGTTGGTGTCATGAAAAAGGCGAGTTCCTACTTGTTTACGAGTTCATGCCAAATGGTAGCCTTGATGCTCATTTGTCAGGGAAGAGGCCTCCTCTTCCATGGAACATGAGGCACAAGATAGCTCTAGGAATAGCCTCAGGAGTGCTCTACCTTCATGAAGAATGGCAACAATGCGTGGTTCACCGAGATATCAAATCAAGCAACGTGATGCTAGATTCCAATTTCAATGTAAAACTTGGAGACTTTGGGTTGGCAAAGATCGTGGACCACGATCTCGGTCCCCAAACAACAGGATTGGCAGGCACTATGGGCTATATGGCTCCAGAATACGTGAGTACAGGAAGAGCCAGTAAGGAGTCAGATGTTTATAGTTTTGGAGTAGTTGCCTTAGAGATAGCCACGGGAAGAAAGGCGAATGACCTTATGAAACACGGAGATGCAGAAATAGGATTGATTGAGTGGGTTTGGGATCATTATGGGAGAGGAGAGCTAACTTTGGCAATGGATGAAATTTTGCAAAAGGAGTATAACGAGAGAGAAGTCGAGTGTTTGATGATTGTAGGGTTATGGTGTGCCCACCCAGATAAGAATTTGAGGCCAACTATTAGGCAAGCAATTCAAGTTTTATACTTTGAGGCTGCCCTGCCAGATCTTCCATCAAAGAAGCCTGTTCCTATGTATCATGTTCCCACACCAAAAGTTGTCTCCCAAGCTGCTTCCTTGACCACAACTCTGCAAACAGGTCGTTGA 1956 0.4233 MANTFCYSHLLLPLLFSFSSLFLSVNSLYFQKFGFASNEADILYMGSAGSLVGTVRFNLNDKYTCQVGWAMYARRVKLWDSSTGHITDFTSHYTFTIDTQGKTTYGHGLCFFLAPFGFEIPPNSASGFLGLFNTTTSLSSQSQIVHVEFDSYPNSEWGETTEHVGINNHSVVSSVSTFWNTSLHSDDVADVWITYNSASKNLSVTWKYQSTPSPQENNSLSYLIDLSKALPEWVTVGFSAATGSVGELHTLLSWEFNSTLDDTEQGKNKATLIVVLSTVLGSIVLIVGGAIVAYALLRRKKKMKSKKEEGVNLTSMNDDLERGAGPRRFSHRELAKATNNFSKDRKLGQGGFGAVYRGYFPHMDLTVAVKKISKGSRQGKKEYVTEVKIISQLRHRNLVQLIGWCHEKGEFLLVYEFMPNGSLDAHLSGKRPPLPWNMRHKIALGIASGVLYLHEEWQQCVVHRDIKSSNVMLDSNFNVKLGDFGLAKIVDHDLGPQTTGLAGTMGYMAPEYVSTGRASKESDVYSFGVVALEIATGRKANDLMKHGDAEIGLIEWVWDHYGRGELTLAMDEILQKEYNEREVECLMIVGLWCAHPDKNLRPTIRQAIQVLYFEAALPDLPSKKPVPMYHVPTPKVVSQAASLTTTLQTGR 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1557 651 ProSitePatterns Legume lectins alpha-chain signature. 230 239 IPR000985 -
Alju12g1557 651 Pfam Legume lectin domain 29 267 IPR001220 GO:0030246
Alju12g1557 651 CDD lectin_legume_LecRK_Arcelin_ConA 34 260 IPR001220 GO:0030246
Alju12g1557 651 ProSitePatterns Serine/Threonine protein kinases active-site signature. 461 473 IPR008271 GO:0004672|GO:0006468
Alju12g1557 651 Gene3D Phosphorylase Kinase; domain 1 326 417 - -
Alju12g1557 651 CDD STKc_IRAK 347 611 - -
Alju12g1557 651 SUPERFAMILY Protein kinase-like (PK-like) 325 637 IPR011009 -
Alju12g1557 651 FunFam L-type lectin-domain containing receptor kinase IX.1 26 269 - -
Alju12g1557 651 SUPERFAMILY Concanavalin A-like lectins/glucanases 28 264 IPR013320 -
Alju12g1557 651 ProSitePatterns Protein kinases ATP-binding region signature. 347 371 IPR017441 GO:0005524
Alju12g1557 651 SMART serkin_6 341 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g1557 651 FunFam Lectin-domain containing receptor kinase A4.3 418 631 - -
Alju12g1557 651 PANTHER - 55 612 - -
Alju12g1557 651 Gene3D - 25 282 - -
Alju12g1557 651 Pfam Protein kinase domain 341 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g1557 651 Gene3D Transferase(Phosphotransferase) domain 1 418 632 - -
Alju12g1557 651 ProSiteProfiles Protein kinase domain profile. 341 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g1557 651 FunFam L-type lectin-domain containing receptor kinase IX.1 326 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1557 Alju-ChrAlju12 36838989 36840944 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1557 14 630 Receptor kinase-like Gene Family AT5G10530 57.987 0.0 731
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Alju12g1557 Pkinase 8.7e-51 CL0016