Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1552 ATGGCATCCTCTGGTTCTGTGTTCTTTATGTTGATCTCCATGTTGCTCTTGTCACTCCAAGACACTGTACACTCTGTTTCCTTTAGCTTCACCAAATTCCAACCGAACATGAACCTAATACAATTCCAAGGTGATGCTTTTCCCTCGGATGATGTTCTTCAGCTCACAAAAAACCACCTCGATGGCCCCATCACAAGCAGTGTTGGTCGAGCCTCGTATGCCGAACCGCTTCGTCTTTGGGATAAAAAAACCGGGAAGCTCACAGACTTCACCACCCATTTTACCTTCATCATGCGAGCCGTTGTTTCCACACAATTCGGCGATGGCATATCCTTCTTCCTTTCTCCTTTCCAATCTGAAATCCCAAATAACTCAGCTGGCGGCTTCCTTGGTCTCTTCAGTGCAGAATCTGCATTCAATAATAATGCCAATAATTCGATAGTTGCGGTTGAGTTCGACAGCTATAACAACACGTGGGATCCAACCTCGGACCATGTCGGAATTAATGTGAATTCCATTGTATCAGTTGCGAATGTTTCATGGAAGAGCAGCATGAAGGATGGGAAAATTGGTAATGTTTGGATAGAATATAATTCCACCACGAAAAATCTAAGTGTGTTCCTTACTTATGCTGAAGATCCAATTTTTATGGGTAATTCTAGCGTTTGGCATATTATTGATTTGAGGGAAGTTTTGCCAGAATGGGTCCGTGTTGGATTCTCTGCTTCTACAGGGCATTGGGTTGAATTACACCAAATTGTATCTTGGTCGTTCAATTCAAGCTTGGAAAGTGATATCAATAATGGGAAAAACAAGAAGATTATTTTGGGGGTTAGTTTAAGTGTATCTCTTGGTTTTCTTATTTGTGTTTCTGGACTGTTATGGCTCACTATCTGGAGAAAGAAACATTACAGGAAGAAGGAAGAAAAAGGTAAAGGCTTTGAAGCTTCCATGGATGATGAATTTGAGAAAGGAACAGGGCCAAAGAGATTCACCCACCAGGAGCTGAGTCAAGCAACAAATGATTTCTCTGAAGCAGGGAAGCTAGGAGAAGGAGGATTTGGAGGTGTATACAAAGGTTTTCTCACAAATGAAAACCTACAAGTAGCTGTGAAGAGAGTTTCAAAAGGATCAAAACAGGGGAAAAAAGAATACATATCAGAAGTGAGAATCATCAGTAGGTTGAGACACAGAAACTTAGTACAACTCATTGGTTGGTGCCATGAACAAGGTGAGTTCCTTCTTGTTTACGAATTCATGCCTAATGGAAGTCTAGATTCACATCTATTTGGAAACAAAACCCCTCTTACTTGGACAGTAAGGTACAAAATAGCCTTGGGCTTGGCCTCTTCTCTCTTATATCTCCACGAAGAATGGGAACAATGCGTAGTTCACAGAGATATCAAGTCAAGTAATGTCATGTTAGACGCAAACTTCAACGCAAAACTCGGTGATTTCGGCCTTGCAAGGCTAGTTGACCATGAACTCGGGTCTCAAACCACAGTTCTAGCAGGCACAATGGGGTACTTAGCCCCCGAGTGCGTAACCACAGGAAAAGCAAGTAAAGAATCTGATGTTTACAGTTTCGGGGTAGTAGCCCTAGAGATCACATGTGGAAGAAGACCAGTAGAAGTAAGAGCTGAGGAACCTGGGAAGGTAAGAATGGTGGAGTGGGTGTGGGACCTATATGGGAAAGGGAAGCTTCTAGAAGCTGCTGATAAGAAACTGAATTTGGAATATGATGAGAGACAAATAGAAAGCTTGATGGTTGTAGGTTTATGGTCTTGCCATCCTGATCAGAGGATGAGACCTTCCATAAGGCAAGTCATAAAAGTTCTGAACTTTGAAGCTGCGTTGCCAAATCTTCCTTCAAAGCTTCCTGTTCCTATGTATTATGCTCCTCCAATGGAAATGTGCAGATTCTCATACACATCGTCTGGGCCCACTACTGCATCAACCAAAGGATCATCTTCATGCTCATCAGTATCAGGAGGATCCAGAAAGTCCCTCTTGTAA 2016 0.4241 MASSGSVFFMLISMLLLSLQDTVHSVSFSFTKFQPNMNLIQFQGDAFPSDDVLQLTKNHLDGPITSSVGRASYAEPLRLWDKKTGKLTDFTTHFTFIMRAVVSTQFGDGISFFLSPFQSEIPNNSAGGFLGLFSAESAFNNNANNSIVAVEFDSYNNTWDPTSDHVGINVNSIVSVANVSWKSSMKDGKIGNVWIEYNSTTKNLSVFLTYAEDPIFMGNSSVWHIIDLREVLPEWVRVGFSASTGHWVELHQIVSWSFNSSLESDINNGKNKKIILGVSLSVSLGFLICVSGLLWLTIWRKKHYRKKEEKGKGFEASMDDEFEKGTGPKRFTHQELSQATNDFSEAGKLGEGGFGGVYKGFLTNENLQVAVKRVSKGSKQGKKEYISEVRIISRLRHRNLVQLIGWCHEQGEFLLVYEFMPNGSLDSHLFGNKTPLTWTVRYKIALGLASSLLYLHEEWEQCVVHRDIKSSNVMLDANFNAKLGDFGLARLVDHELGSQTTVLAGTMGYLAPECVTTGKASKESDVYSFGVVALEITCGRRPVEVRAEEPGKVRMVEWVWDLYGKGKLLEAADKKLNLEYDERQIESLMVVGLWSCHPDQRMRPSIRQVIKVLNFEAALPNLPSKLPVPMYYAPPMEMCRFSYTSSGPTTASTKGSSSCSSVSGGSRKSLL 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1552 671 Pfam Protein kinase domain 344 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g1552 671 SUPERFAMILY Concanavalin A-like lectins/glucanases 24 265 IPR013320 -
Alju12g1552 671 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672|GO:0006468
Alju12g1552 671 ProSitePatterns Legume lectins alpha-chain signature. 232 241 IPR000985 -
Alju12g1552 671 Gene3D Transferase(Phosphotransferase) domain 1 420 634 - -
Alju12g1552 671 ProSitePatterns Legume lectins beta-chain signature. 148 154 IPR019825 -
Alju12g1552 671 FunFam Lectin-domain containing receptor kinase A4.3 420 633 - -
Alju12g1552 671 ProSitePatterns Protein kinases ATP-binding region signature. 349 372 IPR017441 GO:0005524
Alju12g1552 671 ProSiteProfiles Protein kinase domain profile. 343 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g1552 671 SMART serkin_6 343 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g1552 671 PANTHER - 45 623 - -
Alju12g1552 671 Gene3D Phosphorylase Kinase; domain 1 328 419 - -
Alju12g1552 671 FunFam L-type lectin-domain containing receptor kinase IX.1 24 271 - -
Alju12g1552 671 SUPERFAMILY Protein kinase-like (PK-like) 327 639 IPR011009 -
Alju12g1552 671 CDD lectin_legume_LecRK_Arcelin_ConA 26 262 IPR001220 GO:0030246
Alju12g1552 671 FunFam L-type lectin-domain containing receptor kinase IX.1 328 419 - -
Alju12g1552 671 Gene3D - 23 276 - -
Alju12g1552 671 Pfam Legume lectin domain 26 267 IPR001220 GO:0030246
Alju12g1552 671 CDD STKc_IRAK 357 614 - -
Alju12g1552 671 MobiDBLite consensus disorder prediction 648 671 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1552 Alju-ChrAlju12 36799955 36801970 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1552 10 632 Receptor kinase-like Gene Family AT5G10530 51.254 0.0 613
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Alju12g1552 Pkinase 2.2e-49 CL0016