Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1543 ATGGCAAACACTTCTGCCTCATCAGCTCATCAAGAAAAGAGAACACACGCCCATGGATATGCCGCCAGAGACTCCTCAGGAATTGTCTCCCCCTTTCAATTCACCAGAAGGGCCAACGGCGATAATGATATCACCATCAGGATACTGTACTGTGGGATTTGCCACAGCGATGTTCATTATCCCAGAAATGAAATGCATTTACCAGAAGGCTATATCTTCTATCCTATGGTTCCCGGGCATGAGATTGTGGGGGAAGTGATAAAGGTGGGTCGTAATGTACAGAAATTCAAAGTTGGTGATATAGCAGGTTTAGGTCCCATTTTTGATTCGTGTCGCTCCTGTTCTCACTGCAACGAAGATTTAGAAGTATATTGCCCCAAAATGATTATGACTTATAATGCAATTGATAAGGATGGATCAGTGACTTATGGTGGGTATTCTGATAAGACTGTTGTTGATGAACATTTTGCGGTGAAGATACCCAATGGCATGCCCCTTGATGGAGCAGCACCATTGTTGTGTGCTGGCCTCACAGTGTACAGTCCCATGAAGTACTTTGGCTTGTGTGAGGCTGGTATGCATTTGGGTGTGGTGGGCTTAGGTGGACTAGGCCACGTGGCAGTCAAGTTTGCTAAGGCCATGAACATTAAGGTGACTGTGATAAGTACTTCTCCTGGGAAGAAGAAGGAAGCATTGGAAAGTCATGGTGCCGATGCTTTCATTGTTAGTACCGACCAACAACAAATGCAGGAAGCGAGGGGGACCATGGATGGAATCCTAGACACAGTTGCAGGGAATCACTCTGTTCATCCATTGGTTGATTTGTTGAAGACAGGAGGGAAATTGGTTGTGGTAGGAGCACCAATGCAAGAACCTCAGTTACCAGTTATTCCTTTGATCATGGGGAGGAAGACGATCGCAGGAAGTGCAGGAGGAGGAACGAAGGAGAGCCAGGAGATGATTGATTTTGCAGCGAAGCACAATATAACAGCAGACATTGAGCTGATTCCTATGGATTATGTGAACACTGCCTTAGAGAGAGTTTCGAAGAATGATGTGAAGTATCGTTTTGTGATTGATGTGGCCAACACTCTTCATAAGGACGCCTCTGCTGCTACTAGTTAA 1125 0.4542 MANTSASSAHQEKRTHAHGYAARDSSGIVSPFQFTRRANGDNDITIRILYCGICHSDVHYPRNEMHLPEGYIFYPMVPGHEIVGEVIKVGRNVQKFKVGDIAGLGPIFDSCRSCSHCNEDLEVYCPKMIMTYNAIDKDGSVTYGGYSDKTVVDEHFAVKIPNGMPLDGAAPLLCAGLTVYSPMKYFGLCEAGMHLGVVGLGGLGHVAVKFAKAMNIKVTVISTSPGKKKEALESHGADAFIVSTDQQQMQEARGTMDGILDTVAGNHSVHPLVDLLKTGGKLVVVGAPMQEPQLPVIPLIMGRKTIAGSAGGGTKESQEMIDFAAKHNITADIELIPMDYVNTALERVSKNDVKYRFVIDVANTLHKDASAATS 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1543 374 MobiDBLite consensus disorder prediction 1 20 - -
Alju12g1543 374 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 79 93 IPR002328 GO:0008270|GO:0016491
Alju12g1543 374 SUPERFAMILY GroES-like 25 192 IPR011032 -
Alju12g1543 374 Gene3D - 20 361 - -
Alju12g1543 374 FunFam Putative cinnamyl alcohol dehydrogenase 6 332 361 - -
Alju12g1543 374 CDD CAD1 18 360 IPR047109 GO:0016616
Alju12g1543 374 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 164 329 IPR036291 -
Alju12g1543 374 SMART PKS_ER_names_mod 27 359 IPR020843 GO:0016491
Alju12g1543 374 PANTHER ALDEHYDE REDUCTASE 11 364 IPR047109 GO:0016616
Alju12g1543 374 Gene3D - 175 331 - -
Alju12g1543 374 Pfam Zinc-binding dehydrogenase 202 325 IPR013149 -
Alju12g1543 374 Pfam Alcohol dehydrogenase GroES-like domain 42 160 IPR013154 -
Alju12g1543 374 FunFam Cinnamyl alcohol dehydrogenase 175 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1543 Alju-ChrAlju12 36682719 36684236 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1543 14 371 Monolignol Biosynthesis Gene Families AT2G21890 55.710 9.57e-143 408