Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1540 ATGGCAAACACTTCTGTCTCAGCTCAAGAAAAGGAGAGAACACAAGTCTATGGATATGCCGCCAGAGACTCCTCAGGAATTGTCTCCCCTTTTCAATTCACCAGAAGGGCCAACGGAGATAATGATATCACCATCAGGATACTGTACTGTGGGATTTGCCACGGCGATGTTCATTTTCTCAGGAACGAAATGCATTTGCCAGAAGGATATATCTTCTATCCTATGGTTGCCGGGCACGAGATTGTGGGGGAAGTGATAAAGGTGGGTCGTAATGTACAGAAATTTAAAGTTGGTGATATAGCAGGTGTAGGTCCAACTTTTGATTCGTGTCGTTCCTGTTCTCACTGCAACGAAGATTTAGAAGTATATTGCCCCAAAACTATTATGACTTATAATGCTATTGATAAGGATGGATCTGTGACCTATGGTGGCTATTCCGATAAGACTGTGGTTGATGAACATTTTGCTGTGAAAATACCCAATGGCATACCACTTGATAAAGCAGCACCATTGTTGTGTGCCGGCCTCACAGTTTACAGTCCCATGAAGTACTTTGGCTTGTGTGAGGCTGGTATGCATTTGGGTGTGGTGGGCTTAGGTGGACTAGGCCACGTGGCAGTCAAGTTTGCTAAGGCTATGAACATTAAGGTGACTGTGATAAGTACTTCTCCTGGGAAGAAGAAGGAAGCATTGGAAAGTCATGGTGCCGATGCTTTCATTGTTAGTACCGACCAACAACAAATGCAGGAAGCGAGGGGGACCGTGGATGGAATCCTAGACACAGTTGCAGGGAATCACTCTGTTCATCCATTGGTTGATTTGTTGAAGACAGGAGGGAAATTGGTTGTGGTAGGAGCACCAATGCAAGAACCTCAGTTACCAGTTATTCCTTTGATCATGGGAAGAAAGACGATCGCAGGAAGTGCAGGAGGAGGAACGAAGGAGAGCCAGGAGATGATTGATTTTGCAGCGAAGCACAATATAACAGCAGACATTGAGCTGATTCCTATGGATTATGTGAACACTGCCTTAGAGAGAGTTTCAAAGAATGATGTGAAGTATCGTTTTGTGATTGATGTGGCCAACACTCTTCATAAGGACGCCTCTGCTGGTACTAGTTAA 1122 0.4465 MANTSVSAQEKERTQVYGYAARDSSGIVSPFQFTRRANGDNDITIRILYCGICHGDVHFLRNEMHLPEGYIFYPMVAGHEIVGEVIKVGRNVQKFKVGDIAGVGPTFDSCRSCSHCNEDLEVYCPKTIMTYNAIDKDGSVTYGGYSDKTVVDEHFAVKIPNGIPLDKAAPLLCAGLTVYSPMKYFGLCEAGMHLGVVGLGGLGHVAVKFAKAMNIKVTVISTSPGKKKEALESHGADAFIVSTDQQQMQEARGTVDGILDTVAGNHSVHPLVDLLKTGGKLVVVGAPMQEPQLPVIPLIMGRKTIAGSAGGGTKESQEMIDFAAKHNITADIELIPMDYVNTALERVSKNDVKYRFVIDVANTLHKDASAGTS 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1540 373 CDD CAD1 18 359 IPR047109 GO:0016616
Alju12g1540 373 SUPERFAMILY GroES-like 24 191 IPR011032 -
Alju12g1540 373 FunFam Putative cinnamyl alcohol dehydrogenase 6 331 360 - -
Alju12g1540 373 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 78 92 IPR002328 GO:0008270|GO:0016491
Alju12g1540 373 FunFam Cinnamyl alcohol dehydrogenase 174 330 - -
Alju12g1540 373 PANTHER ALDEHYDE REDUCTASE 11 363 IPR047109 GO:0016616
Alju12g1540 373 Pfam Zinc-binding dehydrogenase 201 324 IPR013149 -
Alju12g1540 373 Gene3D - 19 360 - -
Alju12g1540 373 Pfam Alcohol dehydrogenase GroES-like domain 41 159 IPR013154 -
Alju12g1540 373 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 163 328 IPR036291 -
Alju12g1540 373 SMART PKS_ER_names_mod 26 358 IPR020843 GO:0016491
Alju12g1540 373 Gene3D - 174 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1540 Alju-ChrAlju12 36665415 36666925 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1540 12 370 Monolignol Biosynthesis Gene Families AT2G21890 54.444 2.36e-140 402