Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1520 ATGGCTCTTCCCGGTTCTCTGCAGCTGTCCTATGATTCCGGACATCGCGTGGACCTGGGCTGTTATAACAAACATATGAGGATAATGTACAGAACTAGGTTACATTTATCAAGTGCAGCTCCCATATATCATGTTTCGTTCCTGAAGCAGGATTGCTGGAGACCTAAACTCTTTTGCAATATACATAGGCCAATACATACCTTATTTTGCAAATCCCATGCTTTTAAGTGCCATTCTTTTCTAGGACCAGGCCCACCAAGTGAGCCACCTATTTCTAAGGTGGCAGCCACAGCACTATCAAGGTCTTATAATATATTACAATGTAGTCCTGTCACAGTAAAGTTGATTCCAGCCATCGGCATTATAATTTTGGCAGTATGGGGTGTTGGCCCATTAATGTATCACACAAGAAAACTGCTTCTCCAGAGGAGCGACAATAGTTGGAAGAAAAGTAGTACACATTATGTAGTAACTTCTTACATTCAGCCTTTACTATTATGGACTGGAGCTTTACTTATTTGCAGAGCCTTTGACCCATTAAATCTACCTTCAGAAGCCGCTCAAGCTGTCAAGGAACGGCTTTTGAGTTTTGTACGATCATTGTCAACCGTACTTGCCTTTGCCTATTGTATATCACGTGTGATTCAACAAGCACAGAAATTCTTCATGGAGAGTGCTGCTGCTTCCTGTGATACAAGAAATATGGGATTCCACTTTGCTGGCAAAGCTGTTTATTCTGCAGTATGGATTGCTGCCTTCTCTTTGTTCATGGAGTTGCTGGGCTTTTCTACTCACAGGTGGGTTACTGCAGGAGGTCTCGGGACTGTTTTGTTGACTCTTGCTGGTCGTGAGATATTTACAAACTTCCTTTCAAGTGTGATAATTCATGCAACTCGGCCTTTTGTGGTGAATGAATGGATTCAAACAAAGATTGAAGGATATGAAGTTTCTGGTACGGTAGAGAATGTTGGCTGGTGGTCACCAACAATTATACGTGGTGAAAATCGTGAAGCTCTTTACATTCCAAACCACAAGTTCACAATGAGTGTTGTGCGAAACCTAAGTCAGAAAACACATTGGCGCTTCAAGACCCACCTGACTATTAGCCATTTGGATGTTAATAAGATAAATAACATTGTTGCTGACATGAGAAAAGTCTTGGCCAAAAATCCTCAAGTTGAGCAGCAGAGGCTGCACAGGAGGGTGTTTCTGGATAATACAGATCCTGAAAATCAGGCTCTTTTGATAATGGTGTCTTGTTTTGTCAAAACCTCACACCACGAGGAGTTTTTGTGCGTGAAGGAAGCTTTACTACTGGATCTTCTTAGGGTCATCGGCCATCACCGGGCCCGACTTGCAACACCAGTTCGTACACTGCAGAAAATTTACAGTGACGCTGACTTGGATAATATACCATATATGGATTCTGTATTTAGTGGTACTGCAAGTGTTTCTAACAGTCCAATAATAATAGAACCACCATACAAGATCAAAGCAGATGATACAACAAAAAGTCGATCAACACGCCCATCCAACGAGGGAGATAATAAAAAGACAGCCACTCAAGCCAAGGTCAGAGAAACTCATTCTGACTCCAAGGCAGATGTTGAAGCTGTGATATCTAATTCTGATGCAAATGGAAACTTGAAGGTAGCCGTTACATCTGAACATGAGCCAATGAAAATTGAGGCAAATAGTATGTTAAAGGAAAACCTGGAGGCTCCTCATATGTTTGCTTCTAACTCCAAAGTTAGTGAATTTACTGCAAATAACTTGACTGAGAAGAATTCTGATGTTAAACAATATAATAAGAATGCTGTCAAAGGAGGTGAACGTCCTAAGAATATGCCAACAAAACAGAAAGATGAAAGGAAACCAGCACAGACTCAAATGTCAAGGCCTGTCCTTGAAGAGAATATAGTACTTGGTGTGGCATTGGAAGGATCAAAAAGAACTCTTCCTATTGAGGCGGAGATGGATCCATCTACTGCTCTAGAGGCAAAAGAAATGGCTGCCCAAAGTGGAAATAGATCTCTAACAGCTGAGAATGGGGAAGATAAGTAA 2064 0.4142 MALPGSLQLSYDSGHRVDLGCYNKHMRIMYRTRLHLSSAAPIYHVSFLKQDCWRPKLFCNIHRPIHTLFCKSHAFKCHSFLGPGPPSEPPISKVAATALSRSYNILQCSPVTVKLIPAIGIIILAVWGVGPLMYHTRKLLLQRSDNSWKKSSTHYVVTSYIQPLLLWTGALLICRAFDPLNLPSEAAQAVKERLLSFVRSLSTVLAFAYCISRVIQQAQKFFMESAAASCDTRNMGFHFAGKAVYSAVWIAAFSLFMELLGFSTHRWVTAGGLGTVLLTLAGREIFTNFLSSVIIHATRPFVVNEWIQTKIEGYEVSGTVENVGWWSPTIIRGENREALYIPNHKFTMSVVRNLSQKTHWRFKTHLTISHLDVNKINNIVADMRKVLAKNPQVEQQRLHRRVFLDNTDPENQALLIMVSCFVKTSHHEEFLCVKEALLLDLLRVIGHHRARLATPVRTLQKIYSDADLDNIPYMDSVFSGTASVSNSPIIIEPPYKIKADDTTKSRSTRPSNEGDNKKTATQAKVRETHSDSKADVEAVISNSDANGNLKVAVTSEHEPMKIEANSMLKENLEAPHMFASNSKVSEFTANNLTEKNSDVKQYNKNAVKGGERPKNMPTKQKDERKPAQTQMSRPVLEENIVLGVALEGSKRTLPIEAEMDPSTALEAKEMAAQSGNRSLTAENGEDK 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1520 687 MobiDBLite consensus disorder prediction 603 637 - -
Alju12g1520 687 Gene3D - 197 299 - -
Alju12g1520 687 Pfam Mechanosensitive ion channel 242 446 IPR006685 GO:0016020|GO:0055085
Alju12g1520 687 SUPERFAMILY Sm-like ribonucleoproteins 285 355 IPR010920 -
Alju12g1520 687 MobiDBLite consensus disorder prediction 614 628 - -
Alju12g1520 687 MobiDBLite consensus disorder prediction 495 534 - -
Alju12g1520 687 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 1 672 IPR045042 -
Alju12g1520 687 MobiDBLite consensus disorder prediction 668 687 - -
Alju12g1520 687 MobiDBLite consensus disorder prediction 497 534 - -
Alju12g1520 687 Gene3D - 301 356 IPR023408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1520 Alju-ChrAlju12 36437077 36442130 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1520 31 682 Mechanosensitive Ion Channel Family AT5G10490 55.690 0.0 701