Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1512 ATGGAGCCAGAAAAGGGCACCGCCGGACGCGGGTCCGGACCCAAACCCGAAAACTTACACTTCCTTGGCTTATGCAAGTCGCTTCTTCGTCTCCGTAACTACTCCAGATGCCGCGATTTCGCTCTCCATATCCAAAGATCCGACCCAGACATCTCCGACACCGTCGATCGGATCCTCGCAATCACCGACGTTCACCTTGCCGCCGAGAGGCGCCTTAACGGCCACTTCGACTGGTACGCTATTCTCCAACTACGCCGTGATGACTCCGGAAAACATCAACTCATACGGGATCAATTTAAGAAGCTCGCGCAGCTCTTGAATCCAAACAGAAATGAGTTTGCATCCTCAGATGAAGCGTTCGTGCTCGTGCGCGATGCATGGCGCGTGCTTTCGGACCCAGAAAAGAAAGCCGAATACGAGCAGGCAACTGGCGATTGTGTAGCCCAAGAACATTGCAAACAGGGTAGTGGGAGCAACCAAGAGGGATTTGGCGTTGTACCCAGAAATGGGCGTAACGTGAATGTGGGTAAACAGAAAGCTACATTTTGGACCATGTGCCCTTACTGTTGGTGTCTGCATGAGTACGAGAAGATATACGAAGATTGCTCTCTGCGTTGCCAGAAATGCAGGAGGGTGTTTCAGGGGATATCGGTCAAGTCTCCGACGAATGACATGTTAGTGAAGGGGAAAGACCAATACTACTGCTATTGCGCGCATGTACCTTTAAGGTATCCTCTGTCGGAACACTCAGAGGTGAAGGGAAGCAAGTCCGGTATGGAAAAGCCGAGGTGTATGGAAGGCTGGATTAATAATGGAAAATCTTCTGTTGAGATCCCTGAGGACGATGACGTTGACGATTTATCAAAGAACTGCGGAATCGGAGAAGAGGAAAGGGTTTTTCCTTCTGAGCAAGCTGGGATGGGGGGTTCGTATGAAGATTTGGGAAATGGTAAGCGGCGGATGAGGGTGAAAACTGTGGCTAGAAACACAAAGAAAATGACAGGGAACAGGATGAGAAACCAGGCGCATATTTTACGGGATAGTGATGCCGAAGCGTTGGATTTGGATGAAGATGGTGAGGACTTTGGTAACTTTTTGAGTAGTCCTAGCACTGTGAAGCAGATTTCAGTGTTCTTGGCTTGTTTTATTCTGATCATTGTTCATCTTGATGATGCTCAACCTGAAGTCGCTGTTGCTGGTTGGTCTGAAGTGTCTCATCTACTGAATGTGTTGAACCTGAAACTCTTTTCTCTTATCAAGACCAAGATGATGAGCCAAAAGACCCTTAGTACTTGGCTGAGAATCCTGAAACTGATGACAGTAAAACAGTCTCCCAATCTTCCTTCTGCAAATTTGCATTACCTTGTTCTTTGCCTCTTTTCATCTCTGTATATGCAATCTGTTACAGAAAAATTCAAATTCAACTCAATGGCCTTCCTGCGGCAGGGCATGCAGTTTCAAAATTACTATAACTCGGAAGCATACAAGTTAAGAGGCAGCTTTTCTCGAGGAACTATCTTGGAGACATACAGAAACTCGTCCTTAAAACCAAAGTCGAAGGCAGAGATCAAATCACTTGCTGCTAAGAAACACAGTGAAGCAGAGAAGAGACGGAGGATGCGAATCAATGCTCAATATGCCAACCTTCGCACCATCCTCCTCCCCAACTTGGCCAAAATGGACAAGGCATCAGTACTGGCGGAGACTATAAGGAAAGTAAAGGAACTGAAGAAGAATATATCAGAATTGGAAGCAGCTAATGCGAGCAGTTCTGGTGAGATCACTGTGTTTCCCAGTGCAGTAGACAAGTTGAACTTGGAACACTGTAAAGATAAGGAGGGCGTCGTGAAGGCGACCGTGAGTTGTGAGGATAGGCCAGAGTTGATGTTAGACATCTCAAAGGCTCTTAGGTCTGTGAAAGCAGAGATAGTGAAGGCTGAGATGGTGAACGTAGGACGGAGAACCAGAAATGTGTTATGGGTTCAAGGCTTGGAAAATGGAAATGAAGGGATGGTTATGCTGAAGAGGATTCTGAAGGTTGCCATGCTCAAGCCAACTTTCAAAATGCATCGTCTGATTCAGTAA 2085 0.4671 MEPEKGTAGRGSGPKPENLHFLGLCKSLLRLRNYSRCRDFALHIQRSDPDISDTVDRILAITDVHLAAERRLNGHFDWYAILQLRRDDSGKHQLIRDQFKKLAQLLNPNRNEFASSDEAFVLVRDAWRVLSDPEKKAEYEQATGDCVAQEHCKQGSGSNQEGFGVVPRNGRNVNVGKQKATFWTMCPYCWCLHEYEKIYEDCSLRCQKCRRVFQGISVKSPTNDMLVKGKDQYYCYCAHVPLRYPLSEHSEVKGSKSGMEKPRCMEGWINNGKSSVEIPEDDDVDDLSKNCGIGEEERVFPSEQAGMGGSYEDLGNGKRRMRVKTVARNTKKMTGNRMRNQAHILRDSDAEALDLDEDGEDFGNFLSSPSTVKQISVFLACFILIIVHLDDAQPEVAVAGWSEVSHLLNVLNLKLFSLIKTKMMSQKTLSTWLRILKLMTVKQSPNLPSANLHYLVLCLFSSLYMQSVTEKFKFNSMAFLRQGMQFQNYYNSEAYKLRGSFSRGTILETYRNSSLKPKSKAEIKSLAAKKHSEAEKRRRMRINAQYANLRTILLPNLAKMDKASVLAETIRKVKELKKNISELEAANASSSGEITVFPSAVDKLNLEHCKDKEGVVKATVSCEDRPELMLDISKALRSVKAEIVKAEMVNVGRRTRNVLWVQGLENGNEGMVMLKRILKVAMLKPTFKMHRLIQ 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1512 694 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 526 576 IPR011598 GO:0046983
Alju12g1512 694 Pfam Helix-loop-helix DNA-binding domain 530 576 IPR011598 GO:0046983
Alju12g1512 694 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 529 593 IPR036638 GO:0046983
Alju12g1512 694 SMART finulus 532 582 IPR011598 GO:0046983
Alju12g1512 694 Pfam DnaJ domain 77 140 IPR001623 -
Alju12g1512 694 SUPERFAMILY Chaperone J-domain 74 155 IPR036869 -
Alju12g1512 694 ProSiteProfiles dnaJ domain profile. 77 143 IPR001623 -
Alju12g1512 694 SMART dnaj_3 76 135 IPR001623 -
Alju12g1512 694 Gene3D DnaJ domain 75 182 IPR036869 -
Alju12g1512 694 CDD ACT_UUR-ACR-like 619 677 - -
Alju12g1512 694 Coils Coil 566 593 - -
Alju12g1512 694 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 15 337 - -
Alju12g1512 694 CDD DnaJ 77 132 IPR001623 -
Alju12g1512 694 Gene3D - 524 596 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1512 Alju-ChrAlju12 36359947 36363909 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1512 21 279 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 32.700 2.40e-40 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Alju12g1512 DnaJ 1.8e-12 CL0392