Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1492 ATGCCCTTCTACACGCCCCTTCAAATCTCTGGTCAGTTTGAAGCTTTAGGTGCTGAAATTGGTGACAAGTGTGCTGTGCTTGTCGGAGGAATTGACATGACAAAGCAAGCAATCCAAATAGCAAAGAAGCCTCATGCACATGTATGGTATTTACACGCACATGTGATGCAACACGTACAGCTACTGGCTTTGACTTTAAGAAATTTGGGGATGAAAGACATACCACTTAATGGTCATATGAGCCAATCAAAGAGACTTGGAGCCTTGATGGATGTGGTTATCAACTATGATATCCCAACAAATCCCAAGGATTATAAGCACCGTGTGGGAAGAACTGCACGTGCTGGCCGATCTGGGGTTGCAATTTCCCTTGTAAATCAAAACGAGTTGGAGTGGTACATTTATATAGAGAAGCTTGTTATAGGCATGGACTTACCAGAGTATCCTGCGCAGGAAAAACAAGTTCTTGTGAGAAGAGCGTGTTTGTGA 489 0.4335 MPFYTPLQISGQFEALGAEIGDKCAVLVGGIDMTKQAIQIAKKPHAHVWYLHAHVMQHVQLLALTLRNLGMKDIPLNGHMSQSKRLGALMDVVINYDIPTNPKDYKHRVGRTARAGRSGVAISLVNQNELEWYIYIEKLVIGMDLPEYPAQEKQVLVRRACL 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1492 162 Gene3D - 90 157 IPR027417 -
Alju12g1492 162 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 34 149 IPR027417 -
Alju12g1492 162 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 12 156 IPR001650 -
Alju12g1492 162 Pfam Helicase conserved C-terminal domain 91 116 IPR001650 -
Alju12g1492 162 PANTHER RNA HELICASE 91 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1492 Alju-ChrAlju12 36097135 36098063 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1492 92 129 Eukaryotic Initiation Factors Gene Family AT3G13920 52.632 9.90e-10 54.3