Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1471 ATGACCACCACAACCATGGCTTCCTTTAACCTCCTTCCTTCTCTAACTCATCTCTCTATGCTGGCCACTTTAGTTGTTACATTTTTCCCCCTTCAAACTTCCATCGAAGCATCTTATATGGTCCCTTTTAAGTGCTCTGCAAAAATCAACACATGTAATGCCTTACTTTACCACATAAACCATGGTCTTGACATAGAACACGTAGCCTCTCTTTACTCTGTTAACTCATCCCAAATCCAACCAATAACACGGGCCGCCAACCGCGACTACCTCATAACTGTTCCTTGTTCTTGTAAAATCGTCACTAACCTTAGGGGATATTTCTTCGAGACAACACACACAGTGGAGCAAAATGATACATATATAGGTATTTCAAAGCTTTATTACAGTGGACAAGCCTGGTCTCCTACTGATAATGTGACCACCGGCGAAAACTTAACAATACATCTTCCCTGTGGGTGTACAGAAAGTGATTCTCAAATTGTTGTGACATATACAGTCCAGCAGAATGATACAGTAGCAGAAATAGCTAATCTGTTATCATCTACACTTACTGGCATTCAGAACATGAATGGAATTTTAGCTAATAGGCCTTCATTCATAGATGTGGATTGGGTTTTATATGTTCCTAGGGAGCTAAATGGGATTCCATCTTCAAAAGGAAGCGGAAAGAAACTCAAGTATTTTATTATTATTGGTGTCTTAGTGGGGGTGGCATTACTTTCTGGTGTCACAATACTGATTCTTATTCTGTGGAGAAAAAGAGCCACTGAGACCAGCAAAGAAGATACAAAAGCTGCATCAAAAAGATCAGCTTCAAGAGCATTCTCTAAAAGAACAATTTCGAATAGAACTGATCTTTCCTTAAAGAACCATCAATTTCATATAGAAACTATAGAAGAAGTAACATCAATTGACTCAGAAAGACCAGTAACATTTTATCTTGAGGAGATTGAGGAGGCCATAAGCAAAGAAAGTAAAATAATAGGAAAGGGTGGATATGGGACCGTGTATTTTGGAATTTTAGGAGATAAGGAGGTTGCCATAAAAGAGATGAGGTCTAATAAATCCAAAGAGTTCTATGCAGAATTGAAGGTCTTATGCAGGATCCATCATATCAACATTGTGGAGTTATTGGGATATGCCAGTGGAGAAGATAACCTCTATTTGGTGTATGAGTATGTTTCAAAAGGGTCTCTCAGTGACCATCTTCACAATCCATTTCTAAAAGGTCATGAACCTCTTTCATGGACTGCTAGAGCACAGATTGCTCTGGATGCTGCAAAAGGTCTTGAATACATACATGATTACACAAAAGCACGGCACGTGCACCGAGATATCAAGACTAGTAATATTCTTCTTGACAATAAACTCAGAGCCAAGATTGCAGATTTTGGACTAGTAAAGCTGGTAGAACGAACAAATGATGATGATTTCATAGCAACAAGGCTTGTTGGAACACCAGGCTACCTTCCACCAGAATCTGTGAAGGAGCTTCAGGTGACCTCAAAAACCGACGTTTTCGCATTTGGAGTAGTTCTAGCAGAGCTAGTAACAGGGAAACCTGCTCTGTTTCGTGACAGCCAAGAAACCCCCAAAATGAGATCACTTATTTCTGTTATTAATGAAGTATTTGAAGATGATGTTCCAGAGAGTGCTTTAGAGGATATCATAGACAAAAACCTTCGTGATAGCTATCCTGTGGAGGATGTCTTCAAGATTATAGAAATAGCAGAAAGATGCTTACGTGAAGAACCGATAGAGAGGCCAGAAATGAGGGAGATTGTGGTGACACTGTCACAGATTTTGATGTCTTCCACAGAGTGGGAAGCATCACTAGGTGGAAACAGTGAAGTCTTTAGCGGCATATTTACTGGAAGATGA 1884 0.397 MTTTTMASFNLLPSLTHLSMLATLVVTFFPLQTSIEASYMVPFKCSAKINTCNALLYHINHGLDIEHVASLYSVNSSQIQPITRAANRDYLITVPCSCKIVTNLRGYFFETTHTVEQNDTYIGISKLYYSGQAWSPTDNVTTGENLTIHLPCGCTESDSQIVVTYTVQQNDTVAEIANLLSSTLTGIQNMNGILANRPSFIDVDWVLYVPRELNGIPSSKGSGKKLKYFIIIGVLVGVALLSGVTILILILWRKRATETSKEDTKAASKRSASRAFSKRTISNRTDLSLKNHQFHIETIEEVTSIDSERPVTFYLEEIEEAISKESKIIGKGGYGTVYFGILGDKEVAIKEMRSNKSKEFYAELKVLCRIHHINIVELLGYASGEDNLYLVYEYVSKGSLSDHLHNPFLKGHEPLSWTARAQIALDAAKGLEYIHDYTKARHVHRDIKTSNILLDNKLRAKIADFGLVKLVERTNDDDFIATRLVGTPGYLPPESVKELQVTSKTDVFAFGVVLAELVTGKPALFRDSQETPKMRSLISVINEVFEDDVPESALEDIIDKNLRDSYPVEDVFKIIEIAERCLREEPIERPEMREIVVTLSQILMSSTEWEASLGGNSEVFSGIFTGR 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1471 627 SMART serkin_6 323 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g1471 627 ProSitePatterns Protein kinases ATP-binding region signature. 329 350 IPR017441 GO:0005524
Alju12g1471 627 ProSiteProfiles LysM domain profile. 163 209 IPR018392 -
Alju12g1471 627 SUPERFAMILY LysM domain 163 210 IPR036779 -
Alju12g1471 627 ProSiteProfiles Protein kinase domain profile. 323 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g1471 627 SUPERFAMILY Protein kinase-like (PK-like) 321 599 IPR011009 -
Alju12g1471 627 Pfam LysM domain 165 210 IPR018392 -
Alju12g1471 627 Pfam Protein kinase domain 325 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g1471 627 Gene3D Transferase(Phosphotransferase) domain 1 395 616 - -
Alju12g1471 627 Gene3D LysM domain 163 210 IPR036779 -
Alju12g1471 627 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 28 621 IPR044812 GO:0019199|GO:0045087
Alju12g1471 627 Gene3D Phosphorylase Kinase; domain 1 286 394 - -
Alju12g1471 627 FunFam PTI1-like tyrosine-protein kinase 3 395 613 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1471 Alju-ChrAlju12 35923531 35927299 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1471 42 627 Receptor kinase-like Gene Family AT1G51940 38.365 2.22e-125 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Alju12g1471 Pkinase 2.5e-50 CL0016