Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1463 ATGGTCACAGTAACTTGGTGCAATTCAGTGATTCACTACTTTCCTGATTCAGCAAGCATTGAGATGATGAATTTAGAATTTACATGGGTTAAGCAGAGAACTGTCTTTCCATCTGCAATGTCTGGAACAACCCTTCTGTTTCTTCTCCTTTTTCGCTTCGCAATTCCTTCTCTTTCTGATCCAAGAGCTTCAGAAGTAGCTCTGATGTGTAAAAACAAAACCACACCATTTTCCGAACGCAACATCTTCACGGACAATTTCTTAGCTGCTTTAGACGCCTTAACCCCTTCAATCGCTTGGCAAAGATACGCCTCTGTTATTATTAACAGAACTGGAAATTCCATTGTTTATGCTTTTGCACAGTGCATGGACGATCTCACTGAATGGGATTGCAATATCTGCTTCGCTCAGATCAAGACTCAAATGCCAAGATGTTTACCATTTCAGAGAGGGACTCGTGGGGGAAGGGTATTTTTTGATGGGTGTTATCTCAGGTACGATGATTATAATTTCTTCAATGAAAGTCTCAGTGATCAAGACAGAACTGTGTGTGGAAGCAAAGATTTTGGTGGGAATCAGAGTGTTTATGAAGCTAATACAATGGAGTTAGTGAGGAATTTGAGTGTGGAAGCACCAAAGAATGATAGGTTCTTTGTGGGTTTTGTGAGAGGAAGTAATGTGACTGTTTATGGTTTGGCTCAGTGCTGGGACTTTGTTAATGGAAGTGCTTGTGAGAGATGTTTGGCAAAAGCTGTTGAGAATATTAGTTCTTGTACTCCAAAAGAAGAAGGAAGAGTTTTGAATGCTGGTTGTTATATGAGGTATTCAACCCAAAAGTTCTATGACAACATAACTAGTCCCCTTAATGGAAATGAAAGGAACAGCAGCAGTTCAACTATAATGCTGGCTGCATCAAGTGCTGGATCAGCTCTTGTACTGGTTGTTGCAGTAGTTGCTTTCTTTGCAAGGAAGAGGATGCTGAGAAAGAAGAGAGAAAGAAGACAGTTTGGTGCACTTTTGGACAGAGTTTACAAGTCCAAGCTCAATATGACATATGAAGTCCTTGAAAGGGCCACAAATTACTTCAATGCCTCCAATAAGCTTGGACAAGGAGGTTCAGGTTCTGTTTATAAAGGAGTTCTGCCTGATGGGAATATTGTAGCTGTAAAAAGGCTTAGCTTTCACACAACACAATGGGCAGATCATTTCTTCAATGAGGTCAATCTGATAAGTGGCATTCATCATAAGAATCTTGTAAGGCTTCTGGGTTGCAGCATTACAGGACCTGAAAGCCTTCTTGTTTACGAATACGTGCCAAATGAAAGCCTCCATGATCACTTTTCTGTGAAGCAAAAATCTCAGCCCTTGACTTGGGAAGCCAGGCTTAAAATCATATTGGGAACTGCGGAGGGATTGGCCTATCTTCATGAGGAATCACCAGTGAGAATCATTCATAGAGATATTAAACTAAGCAACATTCTGCTTGAAAAGGATTTCACACCCAAGATAGCTGATTTTGGACTTGCTAGATTATTTCCAGAAGATGGGACTCACATTAGTACTACTGTTGCTGGCACACTTGGTTATATGGCTCCTGAATACGTCATTCAAGGAAAATTATCAGATAAAGCAGATATTTACAGTTTTGGGGTTCTTCTTATCGAAATCATATCCGGAAAGAGGAGTAGTTCTTTTGTTCTAAATGCGTCCTCAATACTACAAATGGCTTGGAATCTTCATAGGTCAGGCAGGCTATGTGACATGGTAGATCCGAGGGTTGAAGGCAATTATCCGGCCAAGGAAGCATGCCGGCTACTTGAGATAGGGTTGCTTTGCGTACAAGCATCGGCAAATCTACGACCATCGATGTCAGAAGTTGTGAGAATGATAAGTAGCAATGAGGAAATTCCTGAGCCAACACAACCACCATTTATGGTAGCAAGCAGTGTAGAATGCAGCAAATCTGAATATAATTTTCAGACTTCATCCAAGACACATTCTTCAGAGGACACTATGACTGAAAGCCTTATTCCTTCAAGATCAGTGTCTATTAGTATTAATATTACTCAGAGTTTATCAGTTTAA 2085 0.4048 MVTVTWCNSVIHYFPDSASIEMMNLEFTWVKQRTVFPSAMSGTTLLFLLLFRFAIPSLSDPRASEVALMCKNKTTPFSERNIFTDNFLAALDALTPSIAWQRYASVIINRTGNSIVYAFAQCMDDLTEWDCNICFAQIKTQMPRCLPFQRGTRGGRVFFDGCYLRYDDYNFFNESLSDQDRTVCGSKDFGGNQSVYEANTMELVRNLSVEAPKNDRFFVGFVRGSNVTVYGLAQCWDFVNGSACERCLAKAVENISSCTPKEEGRVLNAGCYMRYSTQKFYDNITSPLNGNERNSSSSTIMLAASSAGSALVLVVAVVAFFARKRMLRKKRERRQFGALLDRVYKSKLNMTYEVLERATNYFNASNKLGQGGSGSVYKGVLPDGNIVAVKRLSFHTTQWADHFFNEVNLISGIHHKNLVRLLGCSITGPESLLVYEYVPNESLHDHFSVKQKSQPLTWEARLKIILGTAEGLAYLHEESPVRIIHRDIKLSNILLEKDFTPKIADFGLARLFPEDGTHISTTVAGTLGYMAPEYVIQGKLSDKADIYSFGVLLIEIISGKRSSSFVLNASSILQMAWNLHRSGRLCDMVDPRVEGNYPAKEACRLLEIGLLCVQASANLRPSMSEVVRMISSNEEIPEPTQPPFMVASSVECSKSEYNFQTSSKTHSSEDTMTESLIPSRSVSISINITQSLSV 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1463 694 ProSiteProfiles Protein kinase domain profile. 362 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g1463 694 Gene3D Transferase(Phosphotransferase) domain 1 438 641 - -
Alju12g1463 694 ProSitePatterns Serine/Threonine protein kinases active-site signature. 483 495 IPR008271 GO:0004672|GO:0006468
Alju12g1463 694 ProSitePatterns Protein kinases ATP-binding region signature. 368 390 IPR017441 GO:0005524
Alju12g1463 694 ProSiteProfiles Gnk2-homologous domain profile. 64 171 IPR002902 -
Alju12g1463 694 ProSiteProfiles Gnk2-homologous domain profile. 177 280 IPR002902 -
Alju12g1463 694 Pfam Protein kinase domain 363 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g1463 694 CDD STKc_IRAK 368 630 - -
Alju12g1463 694 Gene3D Phosphorylase Kinase; domain 1 322 437 - -
Alju12g1463 694 FunFam Cysteine-rich receptor-like protein kinase 2 328 437 - -
Alju12g1463 694 FunFam Cysteine-rich receptor-like protein kinase 3 180 280 - -
Alju12g1463 694 SMART serkin_6 362 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g1463 694 Gene3D - 64 171 IPR038408 -
Alju12g1463 694 Gene3D - 180 280 IPR038408 -
Alju12g1463 694 Pfam Salt stress response/antifungal 188 277 IPR002902 -
Alju12g1463 694 Pfam Salt stress response/antifungal 70 169 IPR002902 -
Alju12g1463 694 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 117 665 - -
Alju12g1463 694 SUPERFAMILY Protein kinase-like (PK-like) 347 652 IPR011009 -
Alju12g1463 694 FunFam Cysteine-rich receptor-like protein kinase 2 438 638 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1463 Alju-ChrAlju12 35843064 35847705 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1463 56 527 Receptor kinase-like Gene Family AT1G70530 61.099 0.0 610
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Alju12g1463 Pkinase 1.2e-47 CL0016