Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1462 ATGGATATTCCAGATTCTGGAGTTGATGAATCTCATCATCAGGAGCGAATCTTCGCTCTTCCTGTGGATTCTGAACACAAAGCCACAGTATTCAAACTATTCTCAGTGGCCAAACCCCACATGCGAGCCTTCCATCTTTCATGGATTTCCTTCTTCTCATGCTTTGTCTCTAGCTTCGCAGCTCCACCTCTTCTTCCCATAATTCGCGACAACCTAAACCTCACAGCCACTGACATCGGAAACGCAGGTATCGCTTCAGTTTCTGGTGCAGTTTTCGCTCGAATCGCCATGGGAACTCTTTGTGACTTGTTTGGCCCTCGTCTTGCTTCTTCTTCTCTCATTCTCCTCACAGCACCAGCAGTTTATTGCTCCTCCATTATCTCTTCTCCTACCTCCTTCCTTCTTGTTCGGTTTTTTACAGGCTTCTCTTTAGCCACCTTCGTGTCCACTCAGTTCTGGATGAGTTCTATGTTCTCTACTCGGGTCGTTGCTTCAGCCAATGGACTTGCAGGTGGATGGGGAAACCTAGGAGGAGGAGCCACACAGCTTGTTATGCCTCTTGTTTTTTCAGTCATTCGTGATATCGGTGCTGTTAAATTCACAGCTTGGCGAATAGCTTTCTTTGTCCCTGCCTTGTTTCAGATGTTAACAGCTTTTGCAGTGTTCATATTTGGCGAGGATTTGCCAGATGGGAACTTTAACAGCTTGAAGAAATCTGGGAAAAAGCCAAAAGATGACTTCAAAAAAGTCATTTTCTTTGGGGTTTCAAATTACAGAGGGTGGATCCTGGGTTTGACTTATGGGTATTGCTTTGGAGTTGAGCTAGCAATAGATAATATCATAGCTGAGTATTTTTATGACAGATTTAACCTGAAACTTCACACAGCAGGGATTATTGCTGCAAGTTTTGGATTGGCTAATATATTTTCTAGACCTGGAGGAGGATATATATCAGATTTAGTGGGAAAGAGGTTTGGAATGAGAGGTAGGCTTTGGGCTTTATGGTTGTGTCAAACCATTGGAGGTGTGTTCTGTGTAATTCTTGGAAGGGTGGCTTCTTTAACATTGTCTATTATTGTGATGATCATATTCTCTATATTTATTCAAGCTGCTTGTGGAATGACATTTGGGGTGGTTCCTTTTGTCTCAAGAAGATCACTGGGAGTGATATCTGGAATGACAGGAGGAGGAGGAAATGTGGGGGCAGTTATAACACAGTTAATATTCTTCACAGGATCAAAATACTCAAAAGAAACAGGTATTACCTTAATGGGTTTGATGGTCATATGTTGTACTCTCCCAATATGTCTCCTATACTTCCCACAATGGGGTGGCATGTTTTGTGGGCCATCGTCCAAGAAGCAAGTTTCAGAACAAGATTACTACTTGTCTGAGTGGAACTCGGAGGAACAAGAGAAAGGGTCCCACCATTCAAGCTTGAAGTTTGCAGATAATAGCAGAAGTGAAAGGGGCAAAAAAGATGGTGCTTTTTCTACTACTGCAACTAGGCCTTCTGATGATGCCACGCCACCACATGTTTGA 1542 0.4306 MDIPDSGVDESHHQERIFALPVDSEHKATVFKLFSVAKPHMRAFHLSWISFFSCFVSSFAAPPLLPIIRDNLNLTATDIGNAGIASVSGAVFARIAMGTLCDLFGPRLASSSLILLTAPAVYCSSIISSPTSFLLVRFFTGFSLATFVSTQFWMSSMFSTRVVASANGLAGGWGNLGGGATQLVMPLVFSVIRDIGAVKFTAWRIAFFVPALFQMLTAFAVFIFGEDLPDGNFNSLKKSGKKPKDDFKKVIFFGVSNYRGWILGLTYGYCFGVELAIDNIIAEYFYDRFNLKLHTAGIIAASFGLANIFSRPGGGYISDLVGKRFGMRGRLWALWLCQTIGGVFCVILGRVASLTLSIIVMIIFSIFIQAACGMTFGVVPFVSRRSLGVISGMTGGGGNVGAVITQLIFFTGSKYSKETGITLMGLMVICCTLPICLLYFPQWGGMFCGPSSKKQVSEQDYYLSEWNSEEQEKGSHHSSLKFADNSRSERGKKDGAFSTTATRPSDDATPPHV 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1462 513 CDD MFS_NRT2_like 44 437 IPR044772 GO:0015112
Alju12g1462 513 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 9 493 IPR044772 GO:0015112
Alju12g1462 513 SUPERFAMILY MFS general substrate transporter 35 439 IPR036259 -
Alju12g1462 513 FunFam Nitrate transporter 2.1 244 445 - -
Alju12g1462 513 Gene3D MFS general substrate transporter like domains 35 233 IPR036259 -
Alju12g1462 513 MobiDBLite consensus disorder prediction 469 513 - -
Alju12g1462 513 Pfam Major Facilitator Superfamily 48 404 IPR011701 GO:0022857|GO:0055085
Alju12g1462 513 FunFam High affinity nitrate transporter 2.5 36 232 - -
Alju12g1462 513 Gene3D MFS general substrate transporter like domains 250 444 IPR036259 -
Alju12g1462 513 MobiDBLite consensus disorder prediction 469 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1462 Alju-ChrAlju12 35837870 35840438 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1462 16 492 Inorganic Solute Cotransporters AT1G12940 75.052 0.0 755