Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1461 ATGCTCTTGCATGAAGAAATCCTTACTGAGGAATCAAGTTGTCTCAATATTCTGCAGAGAACTGTCTTTCCATCTGCAATGTCTGGAACAACCCTTCTGTTTCTTCTCCTTTTTCGCTTCGCAATTCCTTCTCTTTCTGATCCAAGAGCTTCAGAAGTAGCTCTGATGTGTAAAAACAAAACCACACCATTTTCGGAACGCAACATCTTCACAGACAATTTCTTAGCTGCTTTAGACGCCTTAACCCCTTCAATCGCTTGGCAAAGATACGCCTCTGTTATTATTAACAGAACTGGAAATTCCATTGTTTATGCTTTTGCACAGTGCATGGACGATCTCACTGAATGGGATTGCAATATCTGCTTCGCTCAGATCAAGACTCAAATGCCAAGATGTTTACCATTTCAGAGAGGGACTCGTGGGGGAAGGGTATTTTTTGATGGGTGTTATCTCAGGTACGATGATTATAATTTCTTCAATGAAAGTCTCAGTGATCAAGACAGAACTGTGTGTGGAAGCAAAGATTTTGGTGGGAATCAGAGTGTTTATGAAGCTAATACAATGGAGTTAGTGAGGAATTTGAGTGTGGAAGCACCAAAGAATGATAGGTTCTTTGTGGGTTTTGTGAGAGGAAGTAATGTGACTGTTTATGGTTTGGCTCAGTGCTGGGACTTTGTTAATGGAAGTGCTTGTGAGAGATGTTTGGCAAAAGCTGTTGAGAATATTAGTTCTTGTACTCCAAAAGAAGAAGGAAGAGTTTTGAATGCTGGTTGTTATATGAGGTATTCAACCCAAAAGTTCTATGACAACATAACTAGTCCCCTTAATGGAAATGAAAGGAACAGCAGCAGTTCAACTATAATGCTGGCTGCATCAAGTGCTGGATCAGCTCTTGTACTGGTTGTTGCAGTAGTTGCTTTCTTTGCAAGGAAGAGGATGCTGAGAAAGAAGAGAGAAAGAAGACAGTTTGGTGCACTTTTGGACAGAGTTTACAAGTCCAAGCTCAATATGACATATGAAGTCCTTGAAAGGGCCACAAATTACTTCAATGCCTCCAATAAGCTTGGACAAGGAGGTTCAGGTTCTGTTTATAAAGGAGTTCTGCCTGATGGGAATATTGTAGCTGTAAAAAGGCTTAGCTTTCACACAACACAATGGGCAGATCATTTCTTCAATGAGGTCAATCTGATAAGTGGCATTCATCATAAGAATCTTGTAAGGCTTCTGGGTTGCAGCATTACAGGACCTGAAAGCCTTCTTGTTTACGAATACGTGCCAAATGAAAGCCTCCATGATCACTTTTCTGTGAAGCAAAAATCTCAGCCCTTGACTTGGGAAGCCAGGCTTAAAATCATACTGGGAACTGCGGAGGGATTGGCCTATCTTCATGAGGAATCACCAGTGAGAATCATTCATAGAGATATTAAACTAAGCAACATTCTGCTTGAAAAGGATTTCACACCCAAGATAGCTGATTTTGGACTTGCTAGATTATTTCCAGAAGATGGGACTCACATTAGTACTACTGTTGCTGGCACACTTGGTTATATGGCTCCTGAATACGTCATTCAAGGAAAATTATCAGATAAAGCAGATATTTACAGTTTTGGGGTTCTTCTTATCGAAATCATATCCGGAAAAAGGAGTAGTTCTTTTGTTCTAAATGCGTCCTCAATACTACAAATGGCTTGGAATCTTCATAGGTCAGGCAGGCTATGTGACATGGTAGATCCGAGGGTTGAAGGCAATTATCCGGCCAAGGAAGCATGCCGGCTACTTGAGATAGGGTTGCTTTGCGTACAAGCATCGGCGAATCTACGACCATCAATGTCAGAAGTTGTGAGAATGATAAGTAGCAATGAGGAAATTCCTGAGCCAACACAACCACCATTTATGGTAGCAAGCAGTGTAGAATGCAGCAAATCTGAATATAATTTTCAGACTTCATCCAAGACACATTCTTCAGAGGACACTATGACTGAAAGCCTTATTCCTTCAAGATCAGCTGCGTTAAAGTCTTCTCTCCTTCACTTCCCACAAAATCAATTTCTCAACTTTATTGCCTCATTTAGAATTCACATTTCTCTCAAACAGAAACTTCAACTCAGTTCAGAGACTCAATACAAAGCACAGTGTGAAACTAAAGTCGATGCTGATATACAAACACGAGCCAACAAAAGAAACAAGATTTACCTTTTAAGTACTGGTGGAAAAATCATCACCGTCTTGTTTTGCAAACCTCAAATAGATCTCCTGCCAAAAACCCAGAAATCTGTATCAGAGAACATGAAGAAATCGGTCCAATTAGTCTCTTGCCAATCTCTTATTCTCCTTATAATCAGAGCATTACTACCACTGCTTTTGCTACCAGAAACAGTAATGGCAGATCCAAGAACCAAAACAGTGCAAATAATGTGTGGGAGTCAATCAGAGCACAATATCACAAACTTTGTCACAAATTTTGTTACAACCATGGATGATATCAGTGATCAGATGCGCAATAATGGGTATGGCACAGCAGTTTCAGGGACAGGTCCTGATACTAATTATGGCCTTGCTCAGTGCTATGGAGATCTTTCTTTACTTGACTGTGTTCTATGTTATGCTGAGGCAAGAACAGTTCTTCCCAAGTGTTTTCCCAGCAATAGTGGTCGCATATACCTTGATGGTTGCTTTATGAGGGCTGAGAATTACAGCTTCTTTGAAGAGTACAAAGGAGCAGAAGACAAGGTTGTGTGTGGAAACACAACCGGAAAAAGCTCGAGTTTTCAGGCGACAGTAAGGCGGGCGGTTCTGAGTGCAGTTGAAGCTGCAACAAATAATAAAAGGTATGCCAGGGAGAGTGTTGCTGTATCAGGAACAACAAATGAATCAGCCCATGTTTTGGCTAATTGTTGGAGAAGTTTGAACACAAGCTCTTGTAAAGCATGCCTTAAAGATGCATCTTCGTCTATATTGGGATGCTTGCCCTCCTCAGAAGGAAGAGCTCTCAACACTGGCTGCTTCATGAGGTATTCAGACAAAGATTTTCTGAACGATGAACTGGAAAGTGGAAGTTCATCAGGTAATCTGATAGTTCTATTGGTTGCAATTGTCAGTTCAGTTATTGTTTTTGTGGTTGCAATAGCCATTGGGGTTTATGTCTGGAAGCAGAGATACATTCAAATGAAACGAAGAGGTTCAAATGATGTGGAGAAGTTAGCAAAGACCCTTCACCACAACAGCTTGAACTTCAAGTACTCTACCCTGGAGAGGGCAACCGACTCTTTCGATGTTGCGAACAAGCTTGGACAAGGAGGGTTTGGGACAGTTTACAAGGGAATTTTGCCTGATGGAAGAGAGATTGCAGTAAAGAGGTTATATTTTAACAACAGACATAGAGCAGAAGATTTCTATAATGAAGTCAACATAATCAGCAGTGTGGAACATAAAAATCTAGTCAGATTGTTAGGATGCAGTTGTTCAGGACCTGAAAGCCTTCTTGTATATGAGTATCTACCGAACAAGAGTCTTGATCGTTTCATTTTTGATAAAAACAGAGGCAAGGAACTAAACTGGGATAGGAGATATGAAATTATCATTGGGACCGCAGAAGCATTAGCCTACCTGCATGAGAAGTCCAAGATTAAGATAATTCACAGAGATATAAAAGCTAGCAATATCTTATTGGACACAAGGCTTCGAGCTAAAATTGCAGATTTTGGTTTGGCCAGGTCTTTCCAAGAAGACAAAAGCCACATCAGTACAGCTATTGCAGGAACATTAGGGTATATGGCCCCAGAGTACCTCGCTCATGGTCAGTTAACAGAGAAAGCAGATATATATAGTTTTGGAGTGTTACTACTGGAAATAGTTACCGGGAGACAGAACAACAGAAGCAAAGCATTAGAATATTCAGACAGCCTAATCACAGTGACATGGAAGCATTTCCAGGCAGGGACAACAGAACAACTATTCGATCCGAATCTAACATCACAGGAAAACCACAATAACAATGTCAAAGATGAAATTTTAAGAGTGGTGCACATAGGACTTCTATGCACTCAAGAGATCCCTTCATTACGGCCAACAATGGCAAAAGCATTAGAGATGCTAACTAAGGAGGAGGAGCAACTACCTGCTCCCTCTAATCCACCCTTCATAGATGAAAGCAAAATGGAACTCCAAGACATATATGATGATCCACTCTATCCTCTCAATGCAGCTGATTCAATCGCTACTATGTCTTACAGCGAATTTTATCCCAGGTGA 4251 0.4074 MLLHEEILTEESSCLNILQRTVFPSAMSGTTLLFLLLFRFAIPSLSDPRASEVALMCKNKTTPFSERNIFTDNFLAALDALTPSIAWQRYASVIINRTGNSIVYAFAQCMDDLTEWDCNICFAQIKTQMPRCLPFQRGTRGGRVFFDGCYLRYDDYNFFNESLSDQDRTVCGSKDFGGNQSVYEANTMELVRNLSVEAPKNDRFFVGFVRGSNVTVYGLAQCWDFVNGSACERCLAKAVENISSCTPKEEGRVLNAGCYMRYSTQKFYDNITSPLNGNERNSSSSTIMLAASSAGSALVLVVAVVAFFARKRMLRKKRERRQFGALLDRVYKSKLNMTYEVLERATNYFNASNKLGQGGSGSVYKGVLPDGNIVAVKRLSFHTTQWADHFFNEVNLISGIHHKNLVRLLGCSITGPESLLVYEYVPNESLHDHFSVKQKSQPLTWEARLKIILGTAEGLAYLHEESPVRIIHRDIKLSNILLEKDFTPKIADFGLARLFPEDGTHISTTVAGTLGYMAPEYVIQGKLSDKADIYSFGVLLIEIISGKRSSSFVLNASSILQMAWNLHRSGRLCDMVDPRVEGNYPAKEACRLLEIGLLCVQASANLRPSMSEVVRMISSNEEIPEPTQPPFMVASSVECSKSEYNFQTSSKTHSSEDTMTESLIPSRSAALKSSLLHFPQNQFLNFIASFRIHISLKQKLQLSSETQYKAQCETKVDADIQTRANKRNKIYLLSTGGKIITVLFCKPQIDLLPKTQKSVSENMKKSVQLVSCQSLILLIIRALLPLLLLPETVMADPRTKTVQIMCGSQSEHNITNFVTNFVTTMDDISDQMRNNGYGTAVSGTGPDTNYGLAQCYGDLSLLDCVLCYAEARTVLPKCFPSNSGRIYLDGCFMRAENYSFFEEYKGAEDKVVCGNTTGKSSSFQATVRRAVLSAVEAATNNKRYARESVAVSGTTNESAHVLANCWRSLNTSSCKACLKDASSSILGCLPSSEGRALNTGCFMRYSDKDFLNDELESGSSSGNLIVLLVAIVSSVIVFVVAIAIGVYVWKQRYIQMKRRGSNDVEKLAKTLHHNSLNFKYSTLERATDSFDVANKLGQGGFGTVYKGILPDGREIAVKRLYFNNRHRAEDFYNEVNIISSVEHKNLVRLLGCSCSGPESLLVYEYLPNKSLDRFIFDKNRGKELNWDRRYEIIIGTAEALAYLHEKSKIKIIHRDIKASNILLDTRLRAKIADFGLARSFQEDKSHISTAIAGTLGYMAPEYLAHGQLTEKADIYSFGVLLLEIVTGRQNNRSKALEYSDSLITVTWKHFQAGTTEQLFDPNLTSQENHNNNVKDEILRVVHIGLLCTQEIPSLRPTMAKALEMLTKEEEQLPAPSNPPFIDESKMELQDIYDDPLYPLNAADSIATMSYSEFYPR 1416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1461 1416 Gene3D Transferase(Phosphotransferase) domain 1 425 628 - -
Alju12g1461 1416 Gene3D Transferase(Phosphotransferase) domain 1 1166 1376 - -
Alju12g1461 1416 Gene3D Phosphorylase Kinase; domain 1 1051 1165 - -
Alju12g1461 1416 Gene3D Phosphorylase Kinase; domain 1 309 424 - -
Alju12g1461 1416 FunFam Cysteine-rich receptor-like protein kinase 2 799 900 - -
Alju12g1461 1416 ProSiteProfiles Protein kinase domain profile. 1090 1381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g1461 1416 CDD STKc_IRAK 355 617 - -
Alju12g1461 1416 Gene3D - 798 900 IPR038408 -
Alju12g1461 1416 Gene3D - 51 158 IPR038408 -
Alju12g1461 1416 Gene3D - 909 1010 IPR038408 -
Alju12g1461 1416 Gene3D - 167 267 IPR038408 -
Alju12g1461 1416 FunFam Cysteine-rich receptor-like protein kinase 2 425 625 - -
Alju12g1461 1416 ProSiteProfiles Gnk2-homologous domain profile. 51 158 IPR002902 -
Alju12g1461 1416 FunFam Putative DUF26-domain receptor-like protein kinase family protein 1053 1165 - -
Alju12g1461 1416 SUPERFAMILY Protein kinase-like (PK-like) 334 639 IPR011009 -
Alju12g1461 1416 FunFam Cysteine-rich receptor-like protein kinase 3 909 1010 - -
Alju12g1461 1416 Pfam Protein kinase domain 1092 1363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g1461 1416 Pfam Protein kinase domain 350 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g1461 1416 FunFam Cysteine-rich receptor-like protein kinase 2 315 424 - -
Alju12g1461 1416 ProSiteProfiles Gnk2-homologous domain profile. 905 1010 IPR002902 -
Alju12g1461 1416 Pfam Salt stress response/antifungal 57 156 IPR002902 -
Alju12g1461 1416 Pfam Salt stress response/antifungal 175 264 IPR002902 -
Alju12g1461 1416 Pfam Salt stress response/antifungal 917 1007 IPR002902 -
Alju12g1461 1416 Pfam Salt stress response/antifungal 806 898 IPR002902 -
Alju12g1461 1416 ProSiteProfiles Protein kinase domain profile. 349 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g1461 1416 ProSiteProfiles Gnk2-homologous domain profile. 799 900 IPR002902 -
Alju12g1461 1416 SUPERFAMILY Protein kinase-like (PK-like) 1074 1389 IPR011009 -
Alju12g1461 1416 SMART serkin_6 1090 1372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g1461 1416 SMART serkin_6 349 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g1461 1416 ProSitePatterns Protein kinases ATP-binding region signature. 1096 1118 IPR017441 GO:0005524
Alju12g1461 1416 CDD STKc_IRAK 1096 1367 - -
Alju12g1461 1416 FunFam Cysteine-rich receptor-like protein kinase 3 167 267 - -
Alju12g1461 1416 ProSiteProfiles Gnk2-homologous domain profile. 164 267 IPR002902 -
Alju12g1461 1416 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 104 652 - -
Alju12g1461 1416 ProSitePatterns Serine/Threonine protein kinases active-site signature. 470 482 IPR008271 GO:0004672|GO:0006468
Alju12g1461 1416 ProSitePatterns Protein kinases ATP-binding region signature. 355 377 IPR017441 GO:0005524
Alju12g1461 1416 FunFam Cysteine-rich receptor-like protein kinase 2 1166 1373 - -
Alju12g1461 1416 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1211 1223 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1461 Alju-ChrAlju12 35820480 35834616 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1461 37 632 Receptor kinase-like Gene Family AT1G70520 41.186 1.36e-142 449
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Alju12g1461 Pkinase 3.8e-47 CL0016