Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1456 ATGGAGATTTCTTCTGCCACGCTTTCTCCGTCTGGGATAAATTATGAAGTTGTCGCTCTGATGGCCATAAAAAATGAATTACATGATCCCCACAATGTCCTGGAAAGTTGGGATATTAATTCTGTCGATCCTTGTAGCTGGAGGATGATTACTTGTACCCCAGATGGCTCCGTCTCTGCCTTAGGATTGCCCAGTCAGAACTTGTCTGGCAAGCTATCTCCGGGGATTGGAAATCTGACTAACTTGCAATCTGTGTTACTTCAGAACAATGACATTTCCGGCTCAATTCCCGCTGCCATTGGAAAGCTGGAAAAACTTCAGACACTTGATCTTTCCAATAACACATTTAGCGGTGAGATACCTAGTTCTCTGGGGAGCCTCAAGAACCTGCATTATCTGCGGTTGAATAATAACAGCCTTTCAGGATCCTGCCCTCAGTCTCTTAGCAACATTGAAGCTCTAACCCTTGTGGATCTCTCTTATAACAATCTTAGTGGTTCGTTGCCAAGAATATCAGCAAGAACATTCAAGATTGTGGGAAACTCTTTAATTTGTGGTCCAAATGCTAATAATAACTGCTCCAATGTTCTGCCGGAGCCACTCTCCTTCCCGCCTGATTCTTTAAGAGCATATGGGACGAAGAGTCATCATGTTGCAGTTGCTTTTGGAGCAAGTTTTGGGGCTGCTTTTGTGATTGTGATTATTGCTGTATTTATTGTTTGGTTGCGGTACAGACACAACAAACAGATATTCTTTGATGTTAATGAGCAATACGACCCAGAGGTGCGCCTTGGCCATCTGAAAAGGTATACATTCAAAGAACTTCGTGCTGCAACAGATCATTTCAATTCAAAGAACATTCTCGGACGGGGTGGCTTTGGAATAGTCTACAGAGGGCGCTTCAATGATGGCTCTGTTGTAGCAGTGAAAAGGTTGAAGGACTATAATGCTGGTGGTGGTGAGATCCAATTTCAAACAGAAGTTGAGACCATAAGTTTAGCTGTTCACCGGAATCTCTTGAGACTTTGTGGGTTTTGCAGTACTGAAAACGAAAGGCTCCTTGTTTATCCATATATGCCTAATGGCAGTGTAGCCTCCCGATTAAAAGATCATATTCATGGTCGTCCAGCCTTAGATTGGGTGAGGAGGAAAAGAATAGCTTTGGGTACATCAAGAGGGTTAGTTTACTTGCACGAGCAGTGTGACCCTAAAATCATTCACCGTGATGTAAAAGCAGCCAACATATTGTTGGATGAAGACTTTGAAGCAGTTGTCGGTGATTTTGGTTTGGCAAAGCTTCTGGATCACAGAGAATCTCATGTAACTACTGCTGTGCGTGGCACTGTTGGTCACATTGCTCCAGAGTATTTATCTACAGGCCAGTCATCAGAAAAGACTGATGTGTTTGGTTTTGGGATATTACTGCTCGAGCTTATCACAGGTCATAAGGCTTTGGATTTTGGACGAGCAGCTAACCAGAAAGGTGTAATGCTTGATTGGGTTAAGAAGCTACATCAAGAAGGACGATTGAGTCAAATGGTTGACAAAGATTTGAAGGGAAACTATGATGCGGATGAACTGGAAGAAATGGTTCAGGTTGCACTGTTATGTACACAATTTAATCCTCTGCACAGACCTAAGATGTCAGAAGTTTTGAAGATGTTGGAGGGAGATGGCCTGGCTGAGAGGTGGGAGGAAGCTTCACAGAAGACAGAGACAAGGTTCAGGTCTTTTGAAAACCCTCCTCAAAGATACTCAGATTTCATAGAAGAATCTTCACTCATACTTGAAGCTATGGAGCTTTCTGGCCCCAGGTGA 1818 0.4323 MEISSATLSPSGINYEVVALMAIKNELHDPHNVLESWDINSVDPCSWRMITCTPDGSVSALGLPSQNLSGKLSPGIGNLTNLQSVLLQNNDISGSIPAAIGKLEKLQTLDLSNNTFSGEIPSSLGSLKNLHYLRLNNNSLSGSCPQSLSNIEALTLVDLSYNNLSGSLPRISARTFKIVGNSLICGPNANNNCSNVLPEPLSFPPDSLRAYGTKSHHVAVAFGASFGAAFVIVIIAVFIVWLRYRHNKQIFFDVNEQYDPEVRLGHLKRYTFKELRAATDHFNSKNILGRGGFGIVYRGRFNDGSVVAVKRLKDYNAGGGEIQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLKDHIHGRPALDWVRRKRIALGTSRGLVYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRESHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGHKALDFGRAANQKGVMLDWVKKLHQEGRLSQMVDKDLKGNYDADELEEMVQVALLCTQFNPLHRPKMSEVLKMLEGDGLAERWEEASQKTETRFRSFENPPQRYSDFIEESSLILEAMELSGPR 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1456 605 ProSitePatterns Protein kinases ATP-binding region signature. 288 310 IPR017441 GO:0005524
Alju12g1456 605 ProSiteProfiles Protein kinase domain profile. 282 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g1456 605 FunFam Putative LRR receptor-like serine/threonine-protein kinase 13 195 - -
Alju12g1456 605 Pfam Leucine rich repeat N-terminal domain 14 52 IPR013210 -
Alju12g1456 605 SMART serkin_6 282 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g1456 605 ProSitePatterns Serine/Threonine protein kinases active-site signature. 405 417 IPR008271 GO:0004672|GO:0006468
Alju12g1456 605 SUPERFAMILY L domain-like 14 181 - -
Alju12g1456 605 FunFam Somatic embryogenesis receptor kinase 1 251 358 - -
Alju12g1456 605 Gene3D Transferase(Phosphotransferase) domain 1 359 575 - -
Alju12g1456 605 Gene3D Ribonuclease Inhibitor 13 195 IPR032675 -
Alju12g1456 605 Pfam Leucine rich repeat 80 140 IPR001611 GO:0005515
Alju12g1456 605 Gene3D Phosphorylase Kinase; domain 1 251 358 - -
Alju12g1456 605 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 16 566 - -
Alju12g1456 605 SUPERFAMILY Protein kinase-like (PK-like) 259 556 IPR011009 -
Alju12g1456 605 Pfam Protein kinase domain 283 553 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g1456 605 FunFam Somatic embryogenesis receptor-like kinase 1 359 575 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1456 Alju-ChrAlju12 35735685 35740025 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1456 49 605 Receptor kinase-like Gene Family AT1G60800 75.704 0.0 825
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Alju12g1456 Pkinase 5.1e-43 CL0016