Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1444 ATGACTACTCTGTTTCAGTCTCCACCTTCACCTATATATATGTGTGTGTATAAATGCTTCCTCTCTCTTCATCTCAGCTTCGTCCGCTCTCTCTCTCTCTCTATAGCCATGTCAACACTAAACGAGCTTCATCTTCAAGATCGGATATGCTATGTGCAATGTGGATTCTGCAGCACCATGTTACTGGTGAGTGTTCCATGTAGTAGTTTATCAATGGACGTGACTGTGAGGTGCGGAAACTGCACAAACCTTCTCTCTGTTAATATGACGAAAGCTTCTTTTGTCCCTTTTCAACTCTTTCCTTCTTTCCAGCTTACTTGTCTTGATCAGCCCAAAGAAGGAAGTCCAGAAGAAAATGCAGAAAAGAGTAATTGTTCTGATAGTGGGGAAGATGATGCAATAATTCCAGTGAGTCCTGCCATTAATCAACGGCCAGCTGGGAAAAGACAAAAAACACCATCGGCTTATAATCGCTTCATCAGAGAAGAGATCAGAAGGCTCAAGACTCAAAACCCAGACATGGTCCACAAGCAAGCCTTCAGAACAGCAGCCAAAAATTGGGCCAATTTCCCTCAAGCTCAATCTAAAGGAGATGAAGAGAGCTGTAGCCATGTGGACCCACATGAAGATGCCGAGGAGGAGGAGGAGGTAAAAGTAAAATCATAG 666 0.4354 MTTLFQSPPSPIYMCVYKCFLSLHLSFVRSLSLSIAMSTLNELHLQDRICYVQCGFCSTMLLVSVPCSSLSMDVTVRCGNCTNLLSVNMTKASFVPFQLFPSFQLTCLDQPKEGSPEENAEKSNCSDSGEDDAIIPVSPAINQRPAGKRQKTPSAYNRFIREEIRRLKTQNPDMVHKQAFRTAAKNWANFPQAQSKGDEESCSHVDPHEDAEEEEEVKVKS 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1444 221 MobiDBLite consensus disorder prediction 114 128 - -
Alju12g1444 221 SUPERFAMILY HMG-box 143 193 IPR036910 -
Alju12g1444 221 MobiDBLite consensus disorder prediction 199 221 - -
Alju12g1444 221 MobiDBLite consensus disorder prediction 186 221 - -
Alju12g1444 221 PANTHER PROTEIN YABBY 6-RELATED 37 201 IPR006780 GO:0007275
Alju12g1444 221 MobiDBLite consensus disorder prediction 111 155 - -
Alju12g1444 221 Pfam YABBY protein 46 194 IPR006780 GO:0007275
Alju12g1444 221 Gene3D High mobility group box domain 140 220 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1444 Alju-ChrAlju12 35622295 35624670 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1444 13 196 C2C2-YABBY Transcription Factor Family AT1G23420 47.596 5.84e-49 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Alju12g1444 YABBY 6.8e-52 CL0114