Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1425 ATGTTCCTAAAGACGGAAGTTCATTGTCGTTGGGCGTTCCATTTTCTTCTTATTCGGAGAATCGCCCTGAGATTAGAATTTTCGATAGAAATAGAAATGAATTCTAGCAATGAAACGAACGAGGATTCACCGTCTCCAGAAGGATCGCCTTCTCAAATGGAAAACATTAATTTGGAGAGCCTCTCGCAGGAAGATAAAAAGTCGGCACCGGCACCGGCACAGAAGGGAAAGGTCATAGATATCGATGACGCTCCGCCGCCGAAGTCTATTGATTCAATCTCATCATTGAAGACACCGCCATCGCCGTCTAAGGCTACTCTGATTCTGCCAAGCTCACCATCACCTAAAGGATCACCTTCCAAGCAATCACCACAAGCACCGCCACCGCCTCCTCCACCGGTAGCATCACCACCTCCTCCATCGGTAACGCCGCCGCCTCCTTCATCAGTAAAGCAATTGCCTCATTCACCACCGCCACCCCCTACACCACCTCCACCCTCACTCTCGCAACCTCCTATCTCTTCGCCACCGCCACCGCCACCACCGGCGCTGCCACCACCATTATCGAGTAATGGGGAAAATGTCTCTCCCGGCCCCACTGAACAGTCAGCGTCATCATCAGATTCACAGGACTGGTCTTCTTCGAATATCTCTTCTAATAACTCACCACCACCACAACCTTCTGTTACTGTCATTTTCCCCTCGATGACTCAAAGTGCCCCGCCGCCGCCACAAACGCAGGTTGAAGGTTCCAACCATTCTTCACCGCCCCACTCACCAGGACTGAACGCTGGCTCAAATACAAGAACAAGGGGTTCTTCTAACGACTCCGTGCCGTCAACGTCAGGAGGTGACAGTAGCAGTAGCAGCGACAGTAACGCAGCAATATATGTGGGTATTGCATTCGCGGGAGTCTGTATCATTATCTTTGTTGGTTTATGTTTTTTGGTGGCGAGAATGAGAAAGAGAAAACGCGGGGCTGTCGATGATGCGTCACGTATACCGCCAAATATGAAAGCATCAGAAGTTTGGCGTTACTACGGACTGCAGCCCCTGCAAGATGACCCCTTCAGAAATGGGAGTCAAAGGGGAAATGTGCAACGTTTGGGAACTTCAGAGTCAGTGCAGCCCATGAGTGGTCAGATTGCTTTTAGCTATGAAAGTATTGTGGAGATAACAAATGGGTTTTCTAGTCAAAACATCATAGGAGAGGGGGGATTTGGGTGTGTTTACAAGGGGTGGCTGGCAGATGGAAGAGTTGTAGCAGTCAAGAAGCTGAAGGCAGGCAGCGGGCAAGGTGACCGGGAATTCAGGGCAGAAGTGGAGATTATCAGCCGTGTTCATCATCGACATTTGGTATCGCTAGTGGGCTATTGCATATCTGAGCATCAGAAGATTCTTATGTATGAGTTTGTTCCCAATGGAACGCTCAATCATCACTTGCATGCAGGAAAAGGAATGCTAGTGTTAGATTGGGACAAGAGGGTGAAGATAGCAATTGGTGCCGCTAGAGGCCTGGCATATCTGCATGAGGATTGCCACCCAAAGATTATCCACAGAGATATAAAGTCAGCAAATATACTTTTGGATGATGCTTATGTGGCAAAGGTTGCAGACTTTGGACTTGCGAGGCTCACAGATGATGCTAATACTCATGTATCAACTCGCGTCATGGGGACCTTTGGGTACATGGCTCCAGATTATGCTACAAGTGGAAAATTAACAGATAGGTCGGATGTTTTCTCCTTTGGAGTTGTCCTCCTAGAGCTTTTGACTGGAAGGAAACCAGTTGATCCAACTCAACCACTGGGAGAAGAGAGTTTGGTTGAGTGGGCTAGACCTCATCTCATTCATGCAGTTGAGACTGGTGACTTTAGCAAACTAATAGACACTAGGCTTGAAAATCATTATGTGGAGAGTGAAGTACTTAGAATGATTGAAGCAGCTGCAGCATGTGTTCGCCATTCTTCTCCAAAACGGCCCCGGATGCTTCAGGTTGTGAGAGCCTTAGATTGTGGAAGTGAACTAGTTGACCTATCCAATGGAGTGAAGTATGGTCAGAGCACTGTTTATGATTCTGGACAGTATGATGAAGAACTTATGAGATTTAGGATGATGAATGGTGTAAGCTTTGGCAGTGCTGAATTTGATTTGAATGATGAAGAATACAGTTCAAGAGAATTATCCGGCTTTCAACGCGCATTTGCCCTGGATAGTTCAGGTGGCGAGTCCAGCCTTCTAGCCACCAGCAAAGGTGGGAGCAGTAGGCAAACGAAGGGATAA 2283 0.4774 MFLKTEVHCRWAFHFLLIRRIALRLEFSIEIEMNSSNETNEDSPSPEGSPSQMENINLESLSQEDKKSAPAPAQKGKVIDIDDAPPPKSIDSISSLKTPPSPSKATLILPSSPSPKGSPSKQSPQAPPPPPPPVASPPPPSVTPPPPSSVKQLPHSPPPPPTPPPPSLSQPPISSPPPPPPPALPPPLSSNGENVSPGPTEQSASSSDSQDWSSSNISSNNSPPPQPSVTVIFPSMTQSAPPPPQTQVEGSNHSSPPHSPGLNAGSNTRTRGSSNDSVPSTSGGDSSSSSDSNAAIYVGIAFAGVCIIIFVGLCFLVARMRKRKRGAVDDASRIPPNMKASEVWRYYGLQPLQDDPFRNGSQRGNVQRLGTSESVQPMSGQIAFSYESIVEITNGFSSQNIIGEGGFGCVYKGWLADGRVVAVKKLKAGSGQGDREFRAEVEIISRVHHRHLVSLVGYCISEHQKILMYEFVPNGTLNHHLHAGKGMLVLDWDKRVKIAIGAARGLAYLHEDCHPKIIHRDIKSANILLDDAYVAKVADFGLARLTDDANTHVSTRVMGTFGYMAPDYATSGKLTDRSDVFSFGVVLLELLTGRKPVDPTQPLGEESLVEWARPHLIHAVETGDFSKLIDTRLENHYVESEVLRMIEAAAACVRHSSPKRPRMLQVVRALDCGSELVDLSNGVKYGQSTVYDSGQYDEELMRFRMMNGVSFGSAEFDLNDEEYSSRELSGFQRAFALDSSGGESSLLATSKGGSSRQTKG 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1425 760 MobiDBLite consensus disorder prediction 740 760 - -
Alju12g1425 760 PRINTS Proline rich extensin signature 95 116 - -
Alju12g1425 760 PRINTS Proline rich extensin signature 161 186 - -
Alju12g1425 760 PRINTS Proline rich extensin signature 136 153 - -
Alju12g1425 760 PRINTS Proline rich extensin signature 117 133 - -
Alju12g1425 760 SUPERFAMILY Protein kinase-like (PK-like) 372 670 IPR011009 -
Alju12g1425 760 FunFam proline-rich receptor-like protein kinase PERK8 472 685 - -
Alju12g1425 760 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 306 707 IPR047117 -
Alju12g1425 760 ProSiteProfiles Protein kinase domain profile. 396 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g1425 760 Pfam Protein tyrosine and serine/threonine kinase 399 670 IPR001245 GO:0004672|GO:0006468
Alju12g1425 760 MobiDBLite consensus disorder prediction 189 290 - -
Alju12g1425 760 MobiDBLite consensus disorder prediction 36 64 - -
Alju12g1425 760 SMART serkin_6 396 670 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g1425 760 FunFam Proline-rich receptor-like protein kinase PERK8 369 471 - -
Alju12g1425 760 ProSitePatterns Protein kinases ATP-binding region signature. 402 425 IPR017441 GO:0005524
Alju12g1425 760 MobiDBLite consensus disorder prediction 36 290 - -
Alju12g1425 760 MobiDBLite consensus disorder prediction 120 188 - -
Alju12g1425 760 MobiDBLite consensus disorder prediction 91 119 - -
Alju12g1425 760 Gene3D Phosphorylase Kinase; domain 1 361 471 - -
Alju12g1425 760 CDD STKc_IRAK 402 671 - -
Alju12g1425 760 Gene3D Transferase(Phosphotransferase) domain 1 472 681 - -
Alju12g1425 760 ProSitePatterns Serine/Threonine protein kinases active-site signature. 517 529 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1425 Alju-ChrAlju12 35496109 35500866 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1425 251 706 Trihelix Transcription Factor Family AT1G70460 60.251 0.0 563
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Alju12g1425 PK_Tyr_Ser-Thr 8.4e-46 CL0016