Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1385 ATGCCATTTGGGTTGGTCTCTGCTTGGAGCAAGCGTCGCAGAAGCAAGTCTCAAGACCATACAGACCCCTGGATTTACAAGCCTATGGAGTTTTGGCAACTTGAAGATCAAGCAACGAGGCCCACAAAAAAGCAGCATGGTTCATCTGTTTACACACTCAAGGAGATGGAAGAGGCAACAGGATCATTCAGTGAAAATAATCTGCTTGGAAAGGGAGGATTTGGCAGGGTGTACAGAGGCACTTTGCGTTCTGGAGAGGTTGTAGCAATCAAGAAAATGGATCTGCCGGCAATTAAAGAAGCAGAAGGAGAGCGCGAGTTCCGTGTTGAAGTCGACATCTTGAGTAGACTTGACCACCCGAATCTAGTTTCTTTAATAGGCTATTGCGCTGACGGAAAGCACCGATTCCTAGTCTATGAACATATGCATAATGGGAACCTGCAAGATCATTTGAATGGAATTGGGCAAAGAAAAATGGATTGGCCTCAGAGACTCAGAGTAGCACTAGGAGCAGCAAGAGGCCTTGCATATCTCCATTCAAGTTCTGCTGTTGGAATTCCTATTGTTCACAGAGACTTCAAATCCACCAATGTGCTCTTGAATGCCAATTTTGAAGCTAAGATATCTGATTTCGGGCTAGCTAAGTTAATGCCAGAAGGACAGGAGACACATGTGACCGCCAGAGTGCTTGGCACATTTGGTTACTTTGATCCTGAGTATACATCGACGGGGAAACTCACTCTACAAAGCGATGTTTATGCTTTTGGAGTTGTTCTTCTTGAGCTTTTGACAGGACGTCGAGCTGTAGATTTAAACCAAGGTCCAAATGATCAAAACCTTGTATTACAGGTGAGGAACATATTGAATGACCGCAAGAGGCTCCGCAAGGTGATAGACCCAGAAATGGCTCGAAATTCTTATACCCTTGAATCAATAGTTATGTTTGCCAATCTTGCATCACGATGTATCCGTGTTGACAGTAGTGAGAGACCTCCTATGGCAGAATGCGTAAAAGAGCTGCAAGTGATTATCTATACTAATTCAAAAGGCTTGGCAATGGTTATGCATAGTTTGAGAATGATCTAG 1086 0.4392 MPFGLVSAWSKRRRSKSQDHTDPWIYKPMEFWQLEDQATRPTKKQHGSSVYTLKEMEEATGSFSENNLLGKGGFGRVYRGTLRSGEVVAIKKMDLPAIKEAEGEREFRVEVDILSRLDHPNLVSLIGYCADGKHRFLVYEHMHNGNLQDHLNGIGQRKMDWPQRLRVALGAARGLAYLHSSSAVGIPIVHRDFKSTNVLLNANFEAKISDFGLAKLMPEGQETHVTARVLGTFGYFDPEYTSTGKLTLQSDVYAFGVVLLELLTGRRAVDLNQGPNDQNLVLQVRNILNDRKRLRKVIDPEMARNSYTLESIVMFANLASRCIRVDSSERPPMAECVKELQVIIYTNSKGLAMVMHSLRMI 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1385 361 FunFam receptor-like serine/threonine-protein kinase NCRK 142 352 - -
Alju12g1385 361 FunFam serine/threonine-protein kinase PBS1-like 31 141 - -
Alju12g1385 361 SUPERFAMILY Protein kinase-like (PK-like) 49 348 IPR011009 -
Alju12g1385 361 Gene3D Phosphorylase Kinase; domain 1 29 141 - -
Alju12g1385 361 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
Alju12g1385 361 PANTHER OS01G0750732 PROTEIN 29 345 - -
Alju12g1385 361 Pfam Protein kinase domain 64 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g1385 361 Gene3D Transferase(Phosphotransferase) domain 1 142 355 - -
Alju12g1385 361 ProSiteProfiles Protein kinase domain profile. 63 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g1385 361 PIRSF ILK 31 354 - -
Alju12g1385 361 ProSitePatterns Protein kinases ATP-binding region signature. 69 92 IPR017441 GO:0005524
Alju12g1385 361 CDD STKc_IRAK 69 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1385 Alju-ChrAlju12 35075291 35078919 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1385 45 340 Receptor kinase-like Gene Family AT3G58690 46.844 6.30e-92 279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIb Alju12g1385 Pkinase 1.8e-48 CL0016