Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1376 ATGGCGCGTGTATTGTTAGCTGTTGAAAATTGGCGGATAGAGCCTTCACACACCAAATCTGTATATCTTCATCTAGCACAGTCTCTCTCCCCACTCGCACTCTCGCTCCAGAAGCACTCCGGCGACTTCTCCGGTCAAGTTCTGGCAACAGTTCCACCAAAGCGGCCATGGGAAGAGAATGAGGAGACGCCGGCTTTCATCATGTCGGTTTCCTGCACTGACTACTTCCCCGATTCCGACCTTCTCTGCGACGAGGACAACTCCGGAATCTTGTCCGGAGAGTCGACGGAGTGTTCCTCTGACCGCGATTCCTCTCCGTCGTCCACGGAGGAGTCGATCGCCGGGTTTATCGAACACGAGGGCAACTTCGTTCCGGGATGCGAATACTTTTCTAGGTTCCAATCCCAATCGCTTGACGCCTCGGCGAGAGAGGAATCTGTTGCATGGATTCTCAAGGTACAAGCTTACTTTGGGTTTCAGCCGTTGACGGCGTATCTTTCCGTCAACTACATGGATCGGTTTTTGGATTCTCGGCAGCTGCCGCAAGCAAATGGGTGGCCACTGCAACTTCTGTCCGTTGCTTGTTTGTCTTTAGCTGCAAAGATGGAGGAACCTTTAGTTCCGCCCCTTGTGGATCTTCAGGTAGAAGGTGCCAAATACATATTTGAGCCGAAAACGATTCGTAGGATGGAACTGCTTGTTCTAGGTGCTTTGGATTGGAGACTAAGATCAGTCACGCCCTTCAACTTCCTCAGTTTCTTTGCGTGCAAGCTCGATTCAACTGGAACTTTTACTGGCTTCCTTATTTCACGAGCAACAGAAATCATCTTATCAAATATCCAAGAGGCTAGTTTTCTTTCGTACTGGCCATCATGCATTGCTGCCGCCTCCATACTCTGTGCAGCAAATGAAACTCCTAATTGGTCTCTCGTCAGGCCTGAGCATGCTGAGTCATGGTGTGATGGGCTTAGAAAAGAGAAGATTATAGGTTGCTACCAGTTCATGCGAGAATTTGTGATTAGCAATAGCCAGATGAAGCCCCCCAAAATGTTCCCACAGCTTCGAGTAACAAGGCTCACAACAAAGTCAAGTATGTCATCATACTCATCGCCTTCCTCTTCCTCCTCTTCCTCATCACCTTGCAAAAGGAGGAAATTAAATAACTGCATGTGGGTAGATGATGATTATGACAAAGGACACTCGGAGTGA 1209 0.4872 MARVLLAVENWRIEPSHTKSVYLHLAQSLSPLALSLQKHSGDFSGQVLATVPPKRPWEENEETPAFIMSVSCTDYFPDSDLLCDEDNSGILSGESTECSSDRDSSPSSTEESIAGFIEHEGNFVPGCEYFSRFQSQSLDASAREESVAWILKVQAYFGFQPLTAYLSVNYMDRFLDSRQLPQANGWPLQLLSVACLSLAAKMEEPLVPPLVDLQVEGAKYIFEPKTIRRMELLVLGALDWRLRSVTPFNFLSFFACKLDSTGTFTGFLISRATEIILSNIQEASFLSYWPSCIAAASILCAANETPNWSLVRPEHAESWCDGLRKEKIIGCYQFMREFVISNSQMKPPKMFPQLRVTRLTTKSSMSSYSSPSSSSSSSSPCKRRKLNNCMWVDDDYDKGHSE 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1376 402 SUPERFAMILY Cyclin-like 108 242 IPR036915 -
Alju12g1376 402 Gene3D - 126 243 - -
Alju12g1376 402 ProSitePatterns Cyclins signature. 143 174 IPR006671 -
Alju12g1376 402 CDD CYCLIN_AtCycD-like_rpt1 142 240 - -
Alju12g1376 402 FunFam D2/4-type cyclin 126 243 - -
Alju12g1376 402 SMART Cyclin_C_2 245 382 IPR004367 -
Alju12g1376 402 SMART cyclin_7 148 236 IPR013763 -
Alju12g1376 402 SUPERFAMILY Cyclin-like 227 349 IPR036915 -
Alju12g1376 402 Pfam Cyclin, N-terminal domain 115 242 IPR006671 -
Alju12g1376 402 CDD CYCLIN_AtCycD-like_rpt2 245 335 - -
Alju12g1376 402 Pfam Cyclin, C-terminal domain 245 361 IPR004367 -
Alju12g1376 402 PANTHER CYCLINS 116 342 IPR039361 -
Alju12g1376 402 MobiDBLite consensus disorder prediction 362 383 - -
Alju12g1376 402 Gene3D - 117 305 - -
Alju12g1376 402 MobiDBLite consensus disorder prediction 92 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1376 Alju-ChrAlju12 34999532 35004383 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1376 68 395 Core Cell Cycle Gene Families AT1G70210 64.157 1.26e-136 392