Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1374 ATGGCAAATCAATATTTGCGCGAAGCACTGCATTATTGTATCACAAACTTCTGCTTCCTTGTTGACTTGAAAAGTCTCTGCTCATCTTCTTCCTTCATTGCTCCATTCCCAAGCTCTCAACCTCTCTCTACTCAACTTCCCCCAAAACAGACACACCTCTCCACTTTTGATCTTGTCACTCACACGATGGCAGAGGCTATAATTGAGATTGCACTTGGCACTTTGAGTTCACTCATTCAGAATGAGCTCGTTTCGTTTCTGGGCGTCGATGAAGAAATGAGAAGGCTTTCAAGTGTACTCACTACAATCAAGGCAGTGCTTGAAGATGCAGAGGAGAAGCAACTCACAGACAAAGCTCTCAAGGATTGGCTGCGCAAGCTTCGAGATGCAGCTCACTTGCTGGATGATGTCTTGGATGAGATTTCAACACACGCCCTTTCCTTGGAATACCAAAACAAGGTACAAGGCTGTTGCTTATACTATTTAAATCCCGCTCATGTTATGTTCCGTTACAAAATGGCCAAGAAATTGAAAGACATCAGTCAAAGGCTCGATCGAATTGCTGAGGAGAGGTCTAAGTTTCATTTACGCGAGACGGTTCATGAGAGGAGGAATCAAGTCATGGAATGGCGGCAAACGACCTCAATCATTACCCAACCCCAATTCTATGGAAGAGACGCAGACAAGGAGAAAATTGTGAATTTTTTGATTGGTGATGCTTCTGACTCTGAGGACGTATCAGTCTATCCAATTATTGGTATTGGAGGTCTCGGGAAAACTACCCTTGCCCAACAAGTCTTCAATGACGAGAGGGTCGGTCATCATTTTGAGCTAAGAATTTGGGTATGTGTTTCTGAAGACTTCAATCTCAAGAGGCTTTCAAAAGCTATAATAGAGTCTGCTGGGCATGCCTGCGGAGATTCAGAACTAGACCCATTACAAAGAAGACTTCAAGAGGTGGTTGGAAGAAAAAGATATCTGCTGGTCTTGGATGACGTATGGAATGATAACCAGGAGAAATGGGATAAGTTGAAATATGTTATGGCTTGTGGATCAAAAGGTGCTTCGATTCTGGTTACTACTCGTCTTGCAAAGGTTGCAGACATCACAGGAACAATACCTCCTCATCAGTTATCATTGCTATCTACAGATGACTGTTGGGAACTCTTGAAACAACGAGCTTTTGGGCCACATAATGAGGAACGTGCCGAGTTAGTGGCCATAGGGAAGGAGATAGTAGAAAAGTGTCAAGGAGTGCCTCTTGCAGCTAAAACTCTGGGAAGTCTTTTGCGTTTCCAAAGTGACGAAAAAGACTGGCTCCATATTAAGGAAAGTGGGATTTGGAAACTACCACAGGAAGAAGATTCAATCTTACCTGCTTTAAGGCTGAGTTATTTGAATTTACCGACACAACTAAGACAGTGTTTTGCCTACCTCGCAGTGTTCCCCAAAGATCAGCCTTTGAGTAAGAGACAGGTAATAGAACTTTGGATGGCTAATGGGTTCATTTCTACCCATGAAGGGTGTGAAGTGGAGGACGAGGGTGGTAGAGTGTGGAATGAATTATATTTAAGATCGTTTTTTGAGGATGTTGACATAGATGATGATGAATTTGAGTACAACATATATCGATCTGGCAACACGTGGTTCAAGATTCATGATCTTGTTCATGATTTAGCCCAATTTGTTATGGAGGAAGAATGTTGTAGTACTACATTTGAAATCGGTCCACTCAGTGAAAGAACTCGTCATCTCTCATTTTCTGGAGATGAAAGATTTGATAAACAATGGTTATCTCATTTGCACGATGTCAAATCCTTAAGGACTTTGATAACCCTAGCTTATTATGTGCCTTATCCTTGTGATGTATTTATGAGATGTTCCCATTTACGGGCGCTTGACTTCGAAAATTTACATGAGTTGCCATATTCAATTAGCCAATTAAAACATTTGAGGTACTTAAACCTTTCTCATAGTCCTTTTACAGGGCTTCCTGATTCAATATGTAGATTGTGGAATTTACAGATTTTGAATTTGTCCCATTGTTGGAACCTCCAAAAGTTGCCAAATCAGCTAAAGTGCTTAAAGTCTCTCCATCATCTACATCTGGAAGGATGTATTTCATTATCCATATTGGCCCCTGAGATGGGTCAACTAACTTGTTTGAAGACTTTAAACATATATATTGTTGGTATGCAAAAAGGGTTCTTAATGGAAGAATTGAGAAATCTGAAACTTGAAGGAACACTCTACATTGAGCACTTGGAGAGAGTAACAAGTGTGATGGATGCCAAAAAAGCTAATTTGGCCTCTAAGCGCCTAAACAACTTGGAGTTGTCATGGGAAAGGAACCAACAATCCCAATCACAGGAAGATCAGGAGCAAATTCTTGAAGTTCTTCAACCTCATACGCAACTTAAAACTTTGCGTATAAGTGAATATCTTGGTGCCAGACTTCCACAATGGATGGTCAATCCTATGCTTAAAGATTTATATCAATTGGAACTTGAGGAATGTATAAATATTTTCTGCATTTCGTCCTTGGCGAAACTTCCATCTTTGAAGCGTCTAAGGTTGTCAAACATGAATAGCGTGCTATATATAGATGATGGATCTTATGTTGAAAGAGGCTTCGGAGCTCTGGAAGATCTAACGTTGAAAAGGCTACCAAGCCTTGTAAAGTTATCAAGGGAGGATGTAGGCAACATGTTCCCACATCTCTCAAAGTTGGAAATCACTCATTGTCCGCACCTAATAAACTTGCCTTTCCTTCCTTCTGTCACTCAACTAAAGATATCAGGGGAATGTAGCAGGGAGTTACTACTTTCAATTCAAAATCTGCCCAATCTTGAAAGTCTTTATATCTCTAACGATGAAAAGGTGACTTCCTTTCCAAATGAGATGTTAGGAGGCTTTAAGTGCCTTAAAACACTCCATCTTGACTGGCTTCCCAAACTTGAGGCACTCCCAACTGAACTCGACAACTTAAAGTCACTTGAAAAATTGAAAATCTCGAGTTGCAACAAGCTTGAGATGATAACAGAGGAAGCGTTGCAAGGCTTGTGTTCTCTCAAAACATTCATTATTTATAATCAGCCTGGATTCAAATTGTCTGCGGGTTTTCGACACCTTGTTTCCCTTGAAGATCTAATTATTCAAACATGCCTAGAGGTGGAAGAATTGCATGATGCTTTACAGCATATTGTGACCCTTCGATTGTTGCATTTACGTGATCTCCCAAATCTGGCGTCCTTGCCTGACTGGTTAGGGAACCTTAGGTCGCTCGAGTCATTGAGAATAAGTGAATGCCCCAAGTTGATGTCACTTCCGATGAGTACTCAGAGCCTTGCAAATTTGAAATATTTGCTAATTTACAACTGTCCGGAGTTAGCAAAGAGATGTAAGGAGGAAACAGGGGCAGATTGGCACAAAATTGCTCATGTTCCAAGTCGTGAAATACAGGAATGTTGTTCATATACATGA 3483 0.4086 MANQYLREALHYCITNFCFLVDLKSLCSSSSFIAPFPSSQPLSTQLPPKQTHLSTFDLVTHTMAEAIIEIALGTLSSLIQNELVSFLGVDEEMRRLSSVLTTIKAVLEDAEEKQLTDKALKDWLRKLRDAAHLLDDVLDEISTHALSLEYQNKVQGCCLYYLNPAHVMFRYKMAKKLKDISQRLDRIAEERSKFHLRETVHERRNQVMEWRQTTSIITQPQFYGRDADKEKIVNFLIGDASDSEDVSVYPIIGIGGLGKTTLAQQVFNDERVGHHFELRIWVCVSEDFNLKRLSKAIIESAGHACGDSELDPLQRRLQEVVGRKRYLLVLDDVWNDNQEKWDKLKYVMACGSKGASILVTTRLAKVADITGTIPPHQLSLLSTDDCWELLKQRAFGPHNEERAELVAIGKEIVEKCQGVPLAAKTLGSLLRFQSDEKDWLHIKESGIWKLPQEEDSILPALRLSYLNLPTQLRQCFAYLAVFPKDQPLSKRQVIELWMANGFISTHEGCEVEDEGGRVWNELYLRSFFEDVDIDDDEFEYNIYRSGNTWFKIHDLVHDLAQFVMEEECCSTTFEIGPLSERTRHLSFSGDERFDKQWLSHLHDVKSLRTLITLAYYVPYPCDVFMRCSHLRALDFENLHELPYSISQLKHLRYLNLSHSPFTGLPDSICRLWNLQILNLSHCWNLQKLPNQLKCLKSLHHLHLEGCISLSILAPEMGQLTCLKTLNIYIVGMQKGFLMEELRNLKLEGTLYIEHLERVTSVMDAKKANLASKRLNNLELSWERNQQSQSQEDQEQILEVLQPHTQLKTLRISEYLGARLPQWMVNPMLKDLYQLELEECINIFCISSLAKLPSLKRLRLSNMNSVLYIDDGSYVERGFGALEDLTLKRLPSLVKLSREDVGNMFPHLSKLEITHCPHLINLPFLPSVTQLKISGECSRELLLSIQNLPNLESLYISNDEKVTSFPNEMLGGFKCLKTLHLDWLPKLEALPTELDNLKSLEKLKISSCNKLEMITEEALQGLCSLKTFIIYNQPGFKLSAGFRHLVSLEDLIIQTCLEVEELHDALQHIVTLRLLHLRDLPNLASLPDWLGNLRSLESLRISECPKLMSLPMSTQSLANLKYLLIYNCPELAKRCKEETGADWHKIAHVPSREIQECCSYT 1160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1374 1160 CDD RX-CC_like 64 189 IPR038005 -
Alju12g1374 1160 Coils Coil 93 113 - -
Alju12g1374 1160 Gene3D Ribonuclease Inhibitor 1016 1140 IPR032675 -
Alju12g1374 1160 Gene3D Ribonuclease Inhibitor 732 923 IPR032675 -
Alju12g1374 1160 Gene3D Ribonuclease Inhibitor 924 1015 IPR032675 -
Alju12g1374 1160 Gene3D Ribonuclease Inhibitor 573 731 IPR032675 -
Alju12g1374 1160 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 209 479 IPR027417 -
Alju12g1374 1160 Gene3D - 67 185 - -
Alju12g1374 1160 PRINTS Disease resistance protein signature 994 1010 - -
Alju12g1374 1160 PRINTS Disease resistance protein signature 416 430 - -
Alju12g1374 1160 PRINTS Disease resistance protein signature 320 334 - -
Alju12g1374 1160 PRINTS Disease resistance protein signature 248 263 - -
Alju12g1374 1160 FunFam Probable disease resistance protein At1g63360 465 562 - -
Alju12g1374 1160 Gene3D - 380 463 IPR042197 -
Alju12g1374 1160 FunFam Probable disease resistance protein At1g61300 204 372 - -
Alju12g1374 1160 Gene3D - 464 562 IPR036388 -
Alju12g1374 1160 Pfam NB-ARC domain 226 465 IPR002182 GO:0043531
Alju12g1374 1160 Pfam Rx N-terminal domain 68 149 IPR041118 -
Alju12g1374 1160 Gene3D - 203 372 IPR027417 -
Alju12g1374 1160 SUPERFAMILY L domain-like 551 931 - -
Alju12g1374 1160 SUPERFAMILY RNI-like 889 1132 - -
Alju12g1374 1160 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 1036 1132 IPR039203 GO:0050832
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1374 Alju-ChrAlju12 34967408 34972964 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1374 245 732 WRKY Transcription Factor Family AT5G45050 23.827 1.76e-08 57.0