Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1366 ATGCCGACGGATAGATCAAAATCGGAGAAGAACGACGCTGTGGCGCAGCTCCGACGGGATCCCTATGAGGTTCTAGGCCTCTCTCGGAACTCAACAGATCAAGAAATTAAAACTGCTTACCGGAAATTGGCACTCAAATATCATCCTGACAAGAATGATAATGATCCTAAAGCAGCGGATATGTTCAAGGAGGCCACCTTTTCATATAACATCTTGTCAGATCCTGAAAAACGCCATCAGTACGACTCTAATGGTTTTGAGGGTGTTGAATCAGATGACCAAGACTTAGAATTGGATCTTTCGAGTTTAGGTGCTGTGAATACAATGTTTGCAGCACTTTTTAGTAAACTTGGTGTGCCTATTAAGACAACTGTATCAGCAACTGTTTTGGAAGAGGCACTTAATGGGGCAGTGATCATTCATCCACTTCCATTGGGGATGCCTATATCAAAAAGGGTTGAGAAGCAATGTGCTCACTTTTATTCAGTTACATTATTAGAAGAAGAAGCGCAGGATGGATTTGTTTGCCGTGTACAATCATCAGACAAAAGCAAGTTCAAGTTACTATATTTTGATCAAGAAGAGACTGGTGGACTAAGTCTTGCGCTCCAGGAAGACAGTGCAAAAACAGGGAAGGTAACTTCTGCGGGAATGTATTTTCTTGGGTTTCCTGTTTATCAATTGGATCACACCATAAATTCAACAACTGCTGTTAAGGATCCTGATGCATCATTTTTCAGAAAGCTAGATGGGTTCCGACCATGTGAATTAACAGAACTAAAGGCTGGTACTCATGTATTTGCCGTTTATGGCGACAATTTTTTCAGAAGTGCAAGCTACACTATAGAAGCTTCATGTGCTGCGCCTTTTAGTCAAGAAAAAGAAAATCTCAGAAGTGTAGAGGCCCAAATTTTATCTAAAAGGGCAGGCCTAACGAAGTTTGAGTCTGAATACCGAGAGGTTCTGGCACAATTTACAGAGATGACAAGTAGATATACACAAGAAATGCAAGCGATTCATGAGCTACTTAAGCAGAGGAATGAAATACGTGCATCATACACTGTTGCTCCATTAAAACGAAGTAAAACAAAGAGGAGCAAAAGTTCTTCCAAGGAGGAAGGAGAAGATTGCCAAGCAAGAGAGAAGAGACATACAAGGGAGCGACTGAGGAAGAAGAAATGGTATAACATCCACTTAAAAGCTGATAAGAGAAAAGCTTGCTAG 1224 0.4101 MPTDRSKSEKNDAVAQLRRDPYEVLGLSRNSTDQEIKTAYRKLALKYHPDKNDNDPKAADMFKEATFSYNILSDPEKRHQYDSNGFEGVESDDQDLELDLSSLGAVNTMFAALFSKLGVPIKTTVSATVLEEALNGAVIIHPLPLGMPISKRVEKQCAHFYSVTLLEEEAQDGFVCRVQSSDKSKFKLLYFDQEETGGLSLALQEDSAKTGKVTSAGMYFLGFPVYQLDHTINSTTAVKDPDASFFRKLDGFRPCELTELKAGTHVFAVYGDNFFRSASYTIEASCAAPFSQEKENLRSVEAQILSKRAGLTKFESEYREVLAQFTEMTSRYTQEMQAIHELLKQRNEIRASYTVAPLKRSKTKRSKSSSKEEGEDCQAREKRHTRERLRKKKWYNIHLKADKRKAC 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1366 407 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN) 5 406 - -
Alju12g1366 407 MobiDBLite consensus disorder prediction 366 383 - -
Alju12g1366 407 Pfam DnaJ domain 20 82 IPR001623 -
Alju12g1366 407 CDD DnaJ 20 74 IPR001623 -
Alju12g1366 407 ProSiteProfiles dnaJ domain profile. 20 85 IPR001623 -
Alju12g1366 407 SUPERFAMILY Chaperone J-domain 19 89 IPR036869 -
Alju12g1366 407 SMART dnaj_3 19 77 IPR001623 -
Alju12g1366 407 ProSitePatterns Nt-dnaJ domain signature. 62 81 IPR018253 -
Alju12g1366 407 Gene3D DnaJ domain 4 103 IPR036869 -
Alju12g1366 407 MobiDBLite consensus disorder prediction 354 389 - -
Alju12g1366 407 PRINTS DnaJ domain signature 77 96 IPR001623 -
Alju12g1366 407 PRINTS DnaJ domain signature 22 40 IPR001623 -
Alju12g1366 407 PRINTS DnaJ domain signature 40 55 IPR001623 -
Alju12g1366 407 PRINTS DnaJ domain signature 57 77 IPR001623 -
Alju12g1366 407 FunFam Chaperone protein dnaJ 16 4 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1366 Alju-ChrAlju12 34882953 34885833 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1366 18 84 C2H2 Transcription Factor Family AT1G74250 43.056 1.60e-10 60.8