Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1365 ATGGAAAGAGAACATGGCTGTGATATTTCTCCTTCATGGGATAATAATGGAGAAAATGGCCATTCTTCCGTGGAGAAGAGGCTGAGGTTATTTGGGTTTGAGCTGAACCCATCTCAGATCAACGAGGCCTGTGTCAAAGACTCTGTGGAAGCATATGAAGAAAGTGCGAACTCTTCGAACTCGGTTTCATCAGGAGGGGAGAAACCTGAGCAGCAGGAGAAGAGTTCATCTGCAACAAGAGACAACACATCAGATCATGAAAGAAAGTTCGAGTGCCAATATTGTTCCAAGGAATTCGCAAACTCGCAAGCGTTAGGAGGTCACCAGAATGCTCACAAGAAAGAGAGAATGAAGAAGAAGAGGTTGCAGCTTCAAGCCAGGAGGGCTAGCTTAAACTACTACCTTCATCCTTTTCAGAACAACCCTGGTTTTTCCTTCGACGGCTCTAATACGCCTTGGTTCTATGACCCCTCTTCTTATAACTACTCTGAGTTTTCTTTGCATGAAGAACCTCAGATTAGCTTCAAAACCAATGATCAAGAAGCCATTAATATTCTTAATGGTTTTGATCAGAAATCAAATTGGAATAATTTCCATAATCCATCATCCCTTTCCCTTCCTTCTAAACAAGATACTAGCATGTTCACTTTTTCACATACAGATCATAATAGGCCTTTCATCTTCCCTGCAGCTTCAAACCAGAGCCATAGTAATAAGGGTTTGGATCTTCAACTAGGCCTCACTTTGCAGTCAAATACACATAATTTAGCATAG 774 0.416 MEREHGCDISPSWDNNGENGHSSVEKRLRLFGFELNPSQINEACVKDSVEAYEESANSSNSVSSGGEKPEQQEKSSSATRDNTSDHERKFECQYCSKEFANSQALGGHQNAHKKERMKKKRLQLQARRASLNYYLHPFQNNPGFSFDGSNTPWFYDPSSYNYSEFSLHEEPQISFKTNDQEAINILNGFDQKSNWNNFHNPSSLSLPSKQDTSMFTFSHTDHNRPFIFPAASNQSHSNKGLDLQLGLTLQSNTHNLA 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1365 257 ProSiteProfiles Zinc finger C2H2 type domain profile. 90 117 IPR013087 -
Alju12g1365 257 SUPERFAMILY beta-beta-alpha zinc fingers 86 117 IPR036236 -
Alju12g1365 257 PANTHER ZINC FINGER PROTEIN 5 19 250 IPR044299 GO:0010090
Alju12g1365 257 MobiDBLite consensus disorder prediction 1 22 - -
Alju12g1365 257 MobiDBLite consensus disorder prediction 73 87 - -
Alju12g1365 257 Gene3D Classic Zinc Finger 65 137 - -
Alju12g1365 257 MobiDBLite consensus disorder prediction 49 87 - -
Alju12g1365 257 ProSitePatterns Zinc finger C2H2 type domain signature. 92 112 IPR013087 -
Alju12g1365 257 MobiDBLite consensus disorder prediction 52 72 - -
Alju12g1365 257 Pfam C2H2-type zinc finger 90 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1365 Alju-ChrAlju12 34855495 34856268 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1365 27 133 C2H2 Transcription Factor Family AT1G68360 40.870 5.94e-17 76.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Alju12g1365 zf-C2H2_6 2.8e-06 CL0361