Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1354 ATGGAGGTCTGTGATCTCTTGCCGGCGGATTCCGACGAGGTTCATGTCTTGGCTGTCGATGACAGCCTCGTCGATCGGAAAGTCATCGAGCGCTTGCTCAGGATTTCAGCTTGTAAAGTCACTGCTGTGGACAGTGGAATTAGAGCTCTGCAATTCCTTGGACTCGACGACCAGAAATCTCCTTCCGAATCGGACGGCTTTGATGGCTTAAAGGTGGATCTAATCATCACTGACTACTGCATGCCTGGAATGACCGGCTATGAATTACTCAAGAAAATCAAGGAATCGTCCACCTTCAGAGAAATTCCAGTGGTGATCATGTCCTCCGAGAACGTTTTGCCCCGAATAGACAGGTGTTTGGAAGAAGGGGCTGAGGATTTCATAGTGAAGCCGGTGAAGTTATCAGACGTGAAGCGGTTGAGGGATTACATGACGACAAGAGAGAGAGAAGTTAAGGCGGGAAATCAGGAGAGAGAAGGCAGCGTCAGGTTCACCAAAAGGAAGCTCACGGAATCTTCTGATCTGGATTCATCGCCGCCGTCCGTTACATCCTCATCGGCTCTGTCATCGTCGCCGTCGGATTCTGCTTCGCCGTCGTCATCCCCTTCACCTTCGCCGTCCCCGCTCGACTCTCCGATCAGACGGCTTAGAATGACCACCACCGATTGA 669 0.5142 MEVCDLLPADSDEVHVLAVDDSLVDRKVIERLLRISACKVTAVDSGIRALQFLGLDDQKSPSESDGFDGLKVDLIITDYCMPGMTGYELLKKIKESSTFREIPVVIMSSENVLPRIDRCLEEGAEDFIVKPVKLSDVKRLRDYMTTREREVKAGNQEREGSVRFTKRKLTESSDLDSSPPSVTSSSALSSSPSDSASPSSSPSPSPSPLDSPIRRLRMTTTD 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1354 222 Gene3D - 14 190 - -
Alju12g1354 222 PANTHER TWO-COMPONENT RESPONSE REGULATOR 14 181 IPR045279 GO:0009736
Alju12g1354 222 SUPERFAMILY CheY-like 14 146 IPR011006 -
Alju12g1354 222 CDD REC_typeA_ARR 16 140 - -
Alju12g1354 222 ProSiteProfiles Response regulatory domain profile. 15 145 IPR001789 GO:0000160
Alju12g1354 222 SMART REC_2 14 141 IPR001789 GO:0000160
Alju12g1354 222 Pfam Response regulator receiver domain 16 137 IPR001789 GO:0000160
Alju12g1354 222 MobiDBLite consensus disorder prediction 150 173 - -
Alju12g1354 222 MobiDBLite consensus disorder prediction 174 198 - -
Alju12g1354 222 MobiDBLite consensus disorder prediction 150 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1354 Alju-ChrAlju12 34712984 34714015 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1354 8 214 Response Regulator Gene Family AT1G59940 63.285 9.98e-82 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Alju12g1354 Response_reg 3.3e-21 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju12g1354 12 34712984 34714015 Alju13g1530 13 33626707 33629480 ECH
Alju12g1354 12 34712984 34714015 Alju12g1354 12 34712984 34714015 ECH