Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1336 ATGGGGCTGTTAATACTCCCAGTGCCACTGGGATTGGGTCTGACTTGTGATATGGATCAGGGAGATCACCAAAGAACCGATCGCAGAAGAGCTGAAGAATATGCGGATAGGTTAGGCTTTTATCATCATATTATCGTTTCTTCGTCATCATCGAGAATGGATCGAAATTCGAGAGCTAGCGTGCAAATACCTTCGACTCGAACGAGTGGACTCAGCGGAGTGGAGCCTCAGGCCCCCGACAGGCGCACCATTTTCTGCAATGATCGCAGGGCCAACCTTCTCACTCCATTCCCGGGAAACTCGATATCAACTACAAAATATAACATCTTCACTTTCTTGCCAAAAGGACTATTTGAACAGTTCAGGCGGGTAGCTAATCTCTATTTTCTTGGAATCTCAATTTTAGCAGCAACACCAATCAGTCCTATATCTCCAATAACTAATGTGGTTCCTCTGTCTCTGGTGCTTCTTATCTCTCTCATTAAGGAAGCTTTTGAGGACTGGAAACGTCTTCAAAATGACAACGTCATAAACAATAGAATGATAGATGTTTTGCAAGATCAAACATGGGAATCCATAGCCTGGAAAAATCTGCAGGTTGGAGACATTGTCAGGGTTAAGCAGGATGGATTTTTTCCAGCTGATCTGCTTTTCCTGGCCAGTACAAATGCAGATGGTGTCTGCTATATTGAGACTGCTAATTTGGATGGGGAAACCAATCTCAAGATCAGGAAAGCATTGGAGAAAACTTGGGAGTACCTGACTCCAGAGAAGGCATCTGAGTTTCAAGGTGAAATTGAGTGTGAACAACCAAACAATTCATTGTATACCTTCACCGGAAATCTTATTTTTCAAGCACAAACACTACCTCTCAGTCCAAATCAAATTTTGCTGCGAGGCTGCAGTGTAAAAAATACAGGGTACATTGTTGGAGTAGTTATTTTTACAGGGCATGAGACAAAGGTGATGATGAATTCCATGAATGTGCCTTCTAAAAGAAGTACATTGGAGAGGAAGCTTGACAAACTCATACTCGCTCTATTCGCAACTCTCTTTGGTATTTGTTTTATCGGAGCCATAGGCAGTGGCTTCTTTGTAAACAACAAATATTTCTATTTACGCCTTGATGTAGGTGGTGAGGGCTCAGGACAGTTCAATCCAAGTAACAGATTTCTGGTTTTTGTCCTGACTTTATTTACCCTCTTCACTCTATATTCACCTCTCATCCCTATTTCACTTTATGTGTCAATAGAGATGATCAAATTTATTCAGTCTACTCAATTTATCAACAATGACTTGTGCATGTACCATAAGGAAACCAATACCCCAGCTTTGGCCAGGACATCTAATCTGAATGAAGAACTTGGGCAGGTGGAATACATCTTCTCTGACAAAACAGGAACTTTAACAAGAAACTTAATGGAGTTTTTTAAGTGTTCCATTGGAGATCAGGTCTATGGAACCGGTGTTACTGAAATTGAGAGGCAAATAGCAGAGCGTAATGGGATGAAAGTTGAGGAAAATAAATCAGACACTGCAGTGAAAGAGAAGGGCTTTAATTTTGATGATGATAGGCTTATGCAAGGAGCTTGGAGGAATGAGCCTAATCCTGACATTTGTAAGGAATTCTTCAGATGCCTTGCTATATGCCATACTGTACTTCCTGAGGGCGATGAGTCCCCAGAAAAAATCAAGTATCAAGCAGCCTCACCTGATGAGGCTGCTTTGGTCATTGCTGCAAAGAACTTTGGTTTCTTCTTTTACAGACGCACACCGACAGCAATATATGTTCGTGAATCACATGTTGAAAAGAAGGGTCAAATCCAAGATACGCCTTATGAAATTTTGAATGTGCTTGAATTTAACAGTACAAGGAAGCGCCAATCTGTTATATGCCGTTATCCAGATGGGAGGCTTGTATTATACTGTAAGGGTGCTGATACAGTAATCTACGAGAGGCTGGCAGATGGTGCTGATGATATAAAGAAATTGACCAGGGAGTATTTGGAACAATTTGGAGCTGCTGGGTTACGTACATTATGCCTGGCCTACAAAGAATTATCTATACATGTATATGAAAGTTGGAATGAGAAGTTCGTCCAGGCCAAGTCTTCTCTAAGTGATCGTGACAAGAAGTTGGATGAGGTGGCAGAACTTATAGAAACTGATCTGATTTTGATTGGTAGCACTGCCATAGAGGACAAGCTTCAAGAGGGAGTCCCAGCATGTATAGAGACTCTCCAGAGAGCCGGCATTAAAATTTGGGTGCTTACTGGAGACAAGATTGAAACGGCAATAAATATAGCCTATGCATGCAATCTAATATCCAATGAGATGAAAAAATTTATTATCAGTGCAGAAACTGATGCAATTAGAGAAGTTGAAGAAAGGGGCGACCCAGTGGAAATTGCGCATTTTATTCGAGAAGAAGTGAAGAAACAGTTGAAGTCGTCCCTTGAGGAAGCACAGAGCTATTTTCGCTCTCTAAATGGACAAAAATTAGCACTTGTGATTGATGGGAAAAGTCTAATGCATGCATTAGACCCAAGTTTAAGGGTGATGCTTCTGAATTTGGGTTTGAATTGTCATGCGGTTGTTTGCTGTCGAGTTTCGCCTTTACAAAAAGCACAGGTGACAAGGCTAGTGAAGAAAGGTGCAAAAAAAATAACATTAAGTATTGGTGATGGAGCCAATGATGTTAGCATGATTCAAGCTGCTCATGTTGGTGTTGGAATAAGTGGGATGGAGGGGATGCAAGCAGTGATGGCTAGTGATTTTGCCATTGCGCAGTTTCGTTTCCTGGCAGATTTACTTCTTGTCCATGGCCGGTGGTCGTACCTTCGAATATGCAAGGTTATTACATACTTCTTTTACAAGAATCTCACGTTCACTCTTACCCAGTTTTGGTTTACTTTTCAAACGGGGTTTTCTGGTCAGAGGTTCTATGATGATTGGTATCAGTCATTATATAATGTGATCTTCACGGCACTGCCTGTGATTGTTGTTGGACTATTCGACAAGGATGTGAGTGCATCTCTGTCAAGGAAGTATCCTGGACTTTACATGGAGGGAATAAGGAATGTCTTCTTCAAATGGAGTGTTGTGGCAACATGGGCCTTTTTCTCCATATACCAGTCGTTGATATTGTTCAATTTTGTGATTTTGCCAAGTTCAGGTGCTAAAAATTCAGCGGGCAAAACATTGGGACACTGGGATGTCAGTACAATGGCCTATACATGTGTTATAGTAACAGTCAACTTACGTCTACTTATGATCTGTAATTCGGTCACAAGGTGGCACTTAATTGCTGTTGGTGGAAGTATATTAGCATGGTTTATTTTCGCCTTCATATATTCAGTAATCAAACTGGAGAATGAATATTTTGTGATATATGTCATAATGAGCACACCCTATTTCTACCTCACGTTTCTTCTTGTTCCCTTTGCCGCCCTCTTTGGTGACTTTGTCTTCCATGGGATTCAGAGATGGTTCTTCCCCTATGATTATCAGATTATTCAGGAAATTCACAGAGACGAACCAGAGACTGGCAACCGGACAGAGCTGCTGGAGGTGGGGAGTCATTTGACGCCACCAGAGGCGAGGAGCTACGCAATGTCTCAACTGCCTCGTGAGGTATCAAAGCACACAGGCTTTGCTTTTGATTCACCTAGCTATGAGTCCTTTTTCGCTTCACAGTTCGGTGTGTATTCGCCGCTTAAGGCATGGGATGTTGCTAGACGAGCTAGCAGGCGAGCACCAAAGGCGGGCCACAGAAAGTAG 3780 0.4196 MGLLILPVPLGLGLTCDMDQGDHQRTDRRRAEEYADRLGFYHHIIVSSSSSRMDRNSRASVQIPSTRTSGLSGVEPQAPDRRTIFCNDRRANLLTPFPGNSISTTKYNIFTFLPKGLFEQFRRVANLYFLGISILAATPISPISPITNVVPLSLVLLISLIKEAFEDWKRLQNDNVINNRMIDVLQDQTWESIAWKNLQVGDIVRVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALEKTWEYLTPEKASEFQGEIECEQPNNSLYTFTGNLIFQAQTLPLSPNQILLRGCSVKNTGYIVGVVIFTGHETKVMMNSMNVPSKRSTLERKLDKLILALFATLFGICFIGAIGSGFFVNNKYFYLRLDVGGEGSGQFNPSNRFLVFVLTLFTLFTLYSPLIPISLYVSIEMIKFIQSTQFINNDLCMYHKETNTPALARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGDQVYGTGVTEIERQIAERNGMKVEENKSDTAVKEKGFNFDDDRLMQGAWRNEPNPDICKEFFRCLAICHTVLPEGDESPEKIKYQAASPDEAALVIAAKNFGFFFYRRTPTAIYVRESHVEKKGQIQDTPYEILNVLEFNSTRKRQSVICRYPDGRLVLYCKGADTVIYERLADGADDIKKLTREYLEQFGAAGLRTLCLAYKELSIHVYESWNEKFVQAKSSLSDRDKKLDEVAELIETDLILIGSTAIEDKLQEGVPACIETLQRAGIKIWVLTGDKIETAINIAYACNLISNEMKKFIISAETDAIREVEERGDPVEIAHFIREEVKKQLKSSLEEAQSYFRSLNGQKLALVIDGKSLMHALDPSLRVMLLNLGLNCHAVVCCRVSPLQKAQVTRLVKKGAKKITLSIGDGANDVSMIQAAHVGVGISGMEGMQAVMASDFAIAQFRFLADLLLVHGRWSYLRICKVITYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWYQSLYNVIFTALPVIVVGLFDKDVSASLSRKYPGLYMEGIRNVFFKWSVVATWAFFSIYQSLILFNFVILPSSGAKNSAGKTLGHWDVSTMAYTCVIVTVNLRLLMICNSVTRWHLIAVGGSILAWFIFAFIYSVIKLENEYFVIYVIMSTPYFYLTFLLVPFAALFGDFVFHGIQRWFFPYDYQIIQEIHRDEPETGNRTELLEVGSHLTPPEARSYAMSQLPREVSKHTGFAFDSPSYESFFASQFGVYSPLKAWDVARRASRRAPKAGHRK 1259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1336 1259 PRINTS P-type cation-transporting ATPase superfamily signature 462 476 - -
Alju12g1336 1259 PRINTS P-type cation-transporting ATPase superfamily signature 893 912 - -
Alju12g1336 1259 SFLD Haloacid Dehalogenase 444 944 - -
Alju12g1336 1259 ProSitePatterns E1-E2 ATPases phosphorylation site. 464 470 IPR018303 -
Alju12g1336 1259 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 526 731 IPR023299 GO:0000166
Alju12g1336 1259 FunFam Phospholipid-transporting ATPase 570 725 - -
Alju12g1336 1259 NCBIfam phospholipid-translocating P-type ATPase 97 1174 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Alju12g1336 1259 SFLD p-type atpase 444 944 IPR044492 -
Alju12g1336 1259 CDD P-type_ATPase_APLT_Dnf-like 99 1050 - -
Alju12g1336 1259 FunFam Phospholipid-transporting ATPase 726 933 - -
Alju12g1336 1259 Pfam Cation transport ATPase (P-type) 560 653 - -
Alju12g1336 1259 MobiDBLite consensus disorder prediction 56 75 - -
Alju12g1336 1259 SUPERFAMILY Calcium ATPase, transduction domain A 179 323 IPR008250 -
Alju12g1336 1259 FunFam Phospholipid-transporting ATPase IC 459 471 - -
Alju12g1336 1259 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 65 1214 - -
Alju12g1336 1259 NCBIfam HAD-IC family P-type ATPase 866 972 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Alju12g1336 1259 Gene3D - 162 326 - -
Alju12g1336 1259 Gene3D - 726 933 IPR023214 -
Alju12g1336 1259 SUPERFAMILY Calcium ATPase, transmembrane domain M 91 1166 IPR023298 -
Alju12g1336 1259 Pfam Phospholipid-translocating P-type ATPase C-terminal 921 1166 IPR032630 -
Alju12g1336 1259 Gene3D - 574 725 IPR023299 GO:0000166
Alju12g1336 1259 Pfam E1-E2 ATPase 180 371 - -
Alju12g1336 1259 SUPERFAMILY HAD-like 450 935 IPR036412 -
Alju12g1336 1259 Pfam Phospholipid-translocating ATPase N-terminal 84 148 IPR032631 -
Alju12g1336 1259 FunFam Phospholipid-transporting ATPase 158 327 - -
Alju12g1336 1259 MobiDBLite consensus disorder prediction 56 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1336 Alju-ChrAlju12 34504011 34519719 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1336 45 1254 Primary Pumps ATPases AT1G59820 74.117 0.0 1902