Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1316 ATGAATGATTCCTCCTCCATGTCTCCTTCCTCAACCTTCCCCTTTCCCTCCTTCATTCTCTCCTTCCTCCTCCTCGTCTGCTTCATTTCGCACCCTACTTCTGCTCACACTCACACTTGCTCTTCACACTCACCAACCTCCTCGTCTTCTTCTCTTTGCCCTCCTTTCTCTTCAAACCCTCCTTTCCCATTCTCTTTCTCTCCAGGTTGTGGCCACCCTTCCTTCCAAGTCCAATGTTCAACTCCTCACTCCATCATCTCCATTAACAACTTAACCTTCTCTGTTCTTACTTATAACCCCAATTCCTCTTCTCTCACCCTTTTGCCTCATCTTGATAATGCAACAACCTCAGCCACCCGCAGAAATTGCTCCACTCCTCGCTTGCTTTCTCTTCTCAATCGTTCTCTTGATCTCTCTGGCTCTCCTTTCAGAATCTCCGATGCTCTCTGTTCTCGCCTCTCTCATATCCAACCTTGTTCGCCTCCTTCTCTGCCAAACTGTAGCCACTGTCCATGGGAATGTAGCCTCATCAAGAACCCAGCTCACCTCCTCCTTGACTGTGGATCTGCCCATCGCTCCGTTTCAGACCTAGAGAATCGCTGCGAAAGTGATGTTTTGGGGCATATCAACGACATACTTGCTCGAGGGATCGAAGTTGAGTGGGATGAAGCTCAAGATCCTTACTTTTCAAGCTGCAGAAACTGTAGCTCAAACAGGGGAGTTTGTGGATTCAATTCATCCGACCCACATAACCAATTTATATGCTTTCGCTCCAAATCTGAATCTAGTTTTACTCCTGGTTGGATTCAAAGTGTGAATCCCAAGCGTAACACAGTTTTGTCTGTCGTCGTCCCTTTAATGTTGTTGCTTCTTTTTGTTTCTGTTGTTACTGCAATTTTCCGGTCCAGAAGATTCAAGTCATCGAGGACAGAGGAAGACCCAACAATCCTTTTTCTTCACAACCAGCGATCTGCCAGTCTTCTTCCTCCGGTATTCACCTACGAGGAATTGGAGGCGGCCACTAATCGGTTCGACCCGAAACGAAAAATTGGCGATGGTGGGTTCGGGTCGGTATACCTGGGTCAGCTCCATGATAGCAGGATCGTCGCCGTGAAGTATCTCCATAATCACCACACGGCGGCCGCCGCGGGACGAGCTTTTTCCACAAAGTCTTTCTGCAACGAAATTTTGATTCTTTCTTCCATCGACCACCCGAATCTAGTCAAGCTTCATGGGTATTGCAGCGACCCGAGAGGATTGCTTTTGGTCTATGACTACGTCCCCAATGGAACTCTCGCTGAACATCTTCATGGTCCCAAGAGTTCATTCCGAAAGGGGTCTCTGACGTGGCAAGTGAGGCTCGATATTGCTCTGCAAACAGCATTAGCCATGGAGTACCTTCACTGCTCTGTTGTGCCACCAATAGTTCACAGAGACATTACTTCGTCTAACATCTTCGTGGAGAGAGATATGAGGATTAAAGTCGGAGACTTTGGGCTGTCTAGGCTATTGGTTTTACAGGATACGTCGTCGTCTTCAACTGGGTATGTCTGGACGGGTCCACAAGGTACACCTGGGTATTTGGATCCGGATTACCATCGGTCGTTCCGGTTAACGGAGAAGAGTGATGTGTATAGCTTTGGGGTGGTGTTGCTGGAGCTGATTTCCGGGTTGAAGGCGGTGGATCAGAGCAGGGATAAGCAGGAAATCGCGTTGGCCGATATGGTGGTCTCTAGAATCCATATGGGCCAGTTGAATCAAGTGGTGGACCCGGTTTTGGCGAAGGAGGAAGTGATGGACGCCGTCGCTGCGGTGGCAGAGCTGGCGTTCCGTTGCGTGGCGGCGGACAAGGACGACCGGCCGGACTCAAAAGAAGTGGTGGAGGAGCTGAAACGGGTCCGGGCCCAGACGCTGGCGCGTCTCCGATCGTCGTCGAATTCCCACGCCGGTGTTGACGTGGCGAAGAACAATGAAGTGAGGGAATGTGGATTTGAGGTATTGGAGTTTGGCAGTGGTCAGCATTTCGTGCAGCTGAGGGCAAATATAATTCATAGCGTGTCAACAAAGCAAATGAATGAGATATATCTGTCAATCTGCATGCATGACTTTCCCGTGATTTGCGCTAAGAAAATGACCCGACTTGGCTACCATGTGCCCAGGCCAATTAAGAAACAAACACGGCACTACACATGCCACAAGGTTTCACACCCTCCAACGATCCAAAAGTTACACCTTTTTCTTCTTCTTAAGCTCTATATTTACATTCCCCAACACACTTTTTTATGCATCGATTATTGCAATGTACTCTACGGATAA 2316 0.4879 MNDSSSMSPSSTFPFPSFILSFLLLVCFISHPTSAHTHTCSSHSPTSSSSSLCPPFSSNPPFPFSFSPGCGHPSFQVQCSTPHSIISINNLTFSVLTYNPNSSSLTLLPHLDNATTSATRRNCSTPRLLSLLNRSLDLSGSPFRISDALCSRLSHIQPCSPPSLPNCSHCPWECSLIKNPAHLLLDCGSAHRSVSDLENRCESDVLGHINDILARGIEVEWDEAQDPYFSSCRNCSSNRGVCGFNSSDPHNQFICFRSKSESSFTPGWIQSVNPKRNTVLSVVVPLMLLLLFVSVVTAIFRSRRFKSSRTEEDPTILFLHNQRSASLLPPVFTYEELEAATNRFDPKRKIGDGGFGSVYLGQLHDSRIVAVKYLHNHHTAAAAGRAFSTKSFCNEILILSSIDHPNLVKLHGYCSDPRGLLLVYDYVPNGTLAEHLHGPKSSFRKGSLTWQVRLDIALQTALAMEYLHCSVVPPIVHRDITSSNIFVERDMRIKVGDFGLSRLLVLQDTSSSSTGYVWTGPQGTPGYLDPDYHRSFRLTEKSDVYSFGVVLLELISGLKAVDQSRDKQEIALADMVVSRIHMGQLNQVVDPVLAKEEVMDAVAAVAELAFRCVAADKDDRPDSKEVVEELKRVRAQTLARLRSSSNSHAGVDVAKNNEVRECGFEVLEFGSGQHFVQLRANIIHSVSTKQMNEIYLSICMHDFPVICAKKMTRLGYHVPRPIKKQTRHYTCHKVSHPPTIQKLHLFLLLKLYIYIPQHTFLCIDYCNVLYG 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1316 771 Gene3D Transferase(Phosphotransferase) domain 1 427 657 - -
Alju12g1316 771 CDD STKc_IRAK 350 632 - -
Alju12g1316 771 ProSitePatterns Protein kinases ATP-binding region signature. 350 372 IPR017441 GO:0005524
Alju12g1316 771 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 20 639 IPR044652 GO:0004672
Alju12g1316 771 SUPERFAMILY Protein kinase-like (PK-like) 328 636 IPR011009 -
Alju12g1316 771 FunFam Putative serine/threonine-protein kinase At1g18390 family 320 426 - -
Alju12g1316 771 ProSitePatterns Tyrosine protein kinases specific active-site signature. 475 487 IPR008266 GO:0004672|GO:0006468
Alju12g1316 771 ProSiteProfiles Protein kinase domain profile. 344 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g1316 771 Pfam Protein kinase domain 346 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g1316 771 Pfam Wall-associated receptor kinase C-terminal 204 258 IPR032872 -
Alju12g1316 771 Gene3D Phosphorylase Kinase; domain 1 320 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1316 Alju-ChrAlju12 34362403 34365366 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1316 53 656 Receptor kinase-like Gene Family AT1G69910 63.782 0.0 735
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Alju12g1316 Pkinase 1.4e-42 CL0016