Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1289 ATGAGCCGCAAGCGAGAGAAACCCTACTTTTCCCGCCACGCTCCGTACTCTCAGTCTGCGCCCAAGAGGCGTCGACCTCTTCCTGCTCCTGATCCGGAACCCGCCGCCGACAAGCACGCAACAAGGCAGCCGCCGCCTTGTGCGGTGGTGGTTATGGGTCTCCCTTTAGACTGCTCTGTTCTCGATCTCAAATCCCGATTCGAGATTTACGGCCCCATCTCCCGCATCCGCATCGACCGCGGCGGAGTTGGCTACATTACCTATCGGATCAAGGAATATGCCGATGCCGCCATAGCTGCTGCACTTGACCCATCTTTCGGCATCACCATCAGTTCGAAAAAAGTTCAGGTATTGTGGGCGACTGATCCTCTGGCTATGTGGAGGGAAGGAGTAGGTAACAGTAACAAGGAGAAAGGGTCGAGGTCAAAACTTGTGCGTGCTGAGATACCTTTAAGCAGACATGGAAGAGGTAATAAACTTGCCTCAGCTATAGTGAATCCCAACAATAATGAGCCTAGCTCAAGTCGAGACGCGCCTTTCCGGGCCAGAGAAATCGTCGCTTATGATGACATTCTGTAG 579 0.5337 MSRKREKPYFSRHAPYSQSAPKRRRPLPAPDPEPAADKHATRQPPPCAVVVMGLPLDCSVLDLKSRFEIYGPISRIRIDRGGVGYITYRIKEYADAAIAAALDPSFGITISSKKVQVLWATDPLAMWREGVGNSNKEKGSRSKLVRAEIPLSRHGRGNKLASAIVNPNNNEPSSSRDAPFRAREIVAYDDIL 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1289 192 MobiDBLite consensus disorder prediction 1 42 - -
Alju12g1289 192 CDD RRM_SF 49 89 - -
Alju12g1289 192 Gene3D - 29 160 IPR012677 -
Alju12g1289 192 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 49 100 IPR000504 GO:0003723
Alju12g1289 192 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 47 122 IPR000504 GO:0003723
Alju12g1289 192 SUPERFAMILY RNA-binding domain, RBD 16 129 IPR035979 GO:0003676
Alju12g1289 192 PANTHER GEO13361P1-RELATED 31 150 - -
Alju12g1289 192 SMART rrm1_1 48 118 IPR000504 GO:0003723
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1289 1 192 Homeobox Transcription Factor Family AT1G27050 52.657 4.42e-60 184