Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1280 ATGGGATTGGGTGCTGATAATGGTAAGGTGGAGTCTTGGGATGTCAGCAAATCAAAGGGGAAGAAGAAGAATAAGAATAAGAAAGATGATGGCGTTGTGGAAGAGGAAGAAACTGGGTGTTGGTTGAGGCTGAGGTTCATTGGCAGTTGCATTTCTTCGAGATCCAAGGTTGATAGCTCAGTTAGCAGCATCAGCACTCATTACGCTGAAAGTAAATCGACTATCGGTACAAGTAGAGATCAACCAACAGCTCCAGTAGTCTCTTCTACAACCACAAGTAACGCCGAAAGTAATTCATCCACCTCCAAACTTGAAGAGGAGCTTAAAGTTGCCTCCAGGCTGCGAAAGTTCGCTTTTAATGATCTTAAGCTGGCAACAAGAAACTTCCGGCCTGAGAGTCTTCTTGGTGAAGGTGGGTTTGGTTGTGTATTCAAGGGATGGATTGAAGAAAATGGAACTGCTCCAGTGAAACCTGGCACAGGGCTTACAGTTGCTGTAAAAACCCTGAATCATGATGGGCTCCAGGGTCATAAAGAATGGCTGGCTGAAGTAAGTTTTCTTGGTGATCTAATTCATCCAAACCTCGTTAAACTCATAGGCTACTGTATTGAAGATGATCAAAGGTTGCTAGTTTATGAATTTATGCCTCGAGGAAGCCTGGAGAACCACCTTTTTAGGAGATCCCTGCCGCTTCCATGGTCCATTAGAATGAAAATTGCACTCGGGGCTGCAAAGGGTCTTGCTTTTCTTCACGAGGAAGCTGAACGACCTGTAATATATAGGGATTTTAAAACTTCCAATATACTATTGGATGCTGAGTACAATACCAGGCTTTCGGATTTTGGACTTGCCAAAGATGGTCCGGAGGGTGATAAAACCCATGTATCAACCCGGGTGATGGGAACTTATGGTTACGCAGCACCCGAATATGTTATGACAGGTCATCTTACGTCAAAGAGCGATGTGTACAGTTTTGGAGTAGTTCTTCTTGAGATGTTGACTGGCAGAAGATCGATGGACAAAAACCGACCCAATGGTGAACATAACCTTGTTGAATGGGCTCGGCCACATCTTGGAGAGAGAAGAAGGTTCTACAGGTTGATAGATCCTCGGTTAGAAGGTCACTTTTCTATAAAAGGAGCTCAAAAAGCTGCCCAACTGGCTGCTCACTGTCTGAGCAGAGATCCAAAAGCCAGACCCCTAATGAGTGAAGTTGTAGAAGCTCTAAAGCCTCTGCCAAACCTCAAGGACATGGCGAGCTCATCATATTATTTTCAGACGATGCAAGCTGACCGATTCGGTGCCAGCCCTAATACTCGAAACGGGCGAACACTGCTTAGCCGGAATGGGCAGCAGCAGAGGAGCCTTTCTATACCTCATGGCACTCATGCATCTCCTTATCACCACCAGTTTCCCCTACAATCCCCTAAACCTAATGGCAAAGCATAG 1449 0.4541 MGLGADNGKVESWDVSKSKGKKKNKNKKDDGVVEEEETGCWLRLRFIGSCISSRSKVDSSVSSISTHYAESKSTIGTSRDQPTAPVVSSTTTSNAESNSSTSKLEEELKVASRLRKFAFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVSFLGDLIHPNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAEYNTRLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPNLKDMASSSYYFQTMQADRFGASPNTRNGRTLLSRNGQQQRSLSIPHGTHASPYHHQFPLQSPKPNGKA 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1280 482 CDD STKc_IRAK 135 412 - -
Alju12g1280 482 MobiDBLite consensus disorder prediction 12 35 - -
Alju12g1280 482 MobiDBLite consensus disorder prediction 433 460 - -
Alju12g1280 482 SUPERFAMILY Protein kinase-like (PK-like) 115 430 IPR011009 -
Alju12g1280 482 ProSitePatterns Protein kinases ATP-binding region signature. 135 167 IPR017441 GO:0005524
Alju12g1280 482 MobiDBLite consensus disorder prediction 69 101 - -
Alju12g1280 482 FunFam Serine/threonine-protein kinase BIK1 96 214 - -
Alju12g1280 482 Gene3D Transferase(Phosphotransferase) domain 1 215 430 - -
Alju12g1280 482 ProSitePatterns Serine/Threonine protein kinases active-site signature. 258 270 IPR008271 GO:0004672|GO:0006468
Alju12g1280 482 Pfam Protein tyrosine and serine/threonine kinase 133 409 IPR001245 GO:0004672|GO:0006468
Alju12g1280 482 Gene3D Phosphorylase Kinase; domain 1 88 214 - -
Alju12g1280 482 MobiDBLite consensus disorder prediction 69 104 - -
Alju12g1280 482 MobiDBLite consensus disorder prediction 433 482 - -
Alju12g1280 482 FunFam Probable serine/threonine-protein kinase PBL8 215 430 - -
Alju12g1280 482 ProSiteProfiles Protein kinase domain profile. 129 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g1280 482 MobiDBLite consensus disorder prediction 1 35 - -
Alju12g1280 482 PANTHER OS01G0588500 PROTEIN-RELATED 92 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1280 Alju-ChrAlju12 33858973 33863048 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1280 98 409 Glycoside Hydrolase AT3G07070 55.836 2.97e-117 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Alju12g1280 PK_Tyr_Ser-Thr 1.2e-45 CL0016