Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1266 ATGACAGTTTTCTGGGTTTCGTTTTTCCCTTACCTTCTTTCTGCAATTTTTCTTGTTCTTCTGCTTATTCACAATTCAACTGCACAGTTAACACCAAGTGAGAGTAGAATTCTGTTCCAAGTTCAGAAAATTCTTGAATATCCTCAGGTTCTTCAAGGATGGAACAACTGGACTAATTTCTGTTATCTTCCTTATTCACCTTCTCTCCAGATTGTCTGCTCTAATAATCATGTAACAGAATTAACAATCATTGGAAACAAAACCTCTCTTTCTGAAAGATTTTCCATTGATTCTTTCATCACTGTCTTGACAAAGCTTTCAAATTTGAAGGTACTTTCTTTAGTGTCCTTGGGTTTGTGGGGTCCTTTACCAGTCAAGCTCAACAGGTTCAGGTCTCTTCAAGTTCTGAACTTGACCTCAAATTCCATTCATGGCGAGATACCACCATCAATCTCTTCCATGAAAACTCTCAAAAGTTTGGTTTTGGCTGGGAATTTGTTCAATGGGACTGTCCCAGATCTTGAAAGATTAACTTCTCTTGAAGAACTCAATCTGGGAAACAACAAACTAGGTCCTGAGTTCCCTTCATTACCCAATAATCTTGTAACTTTAGTATTGAGAAACAATTCTCTGAGGTCTAAATTTCCTTCCAAGTTCAATCAGTTTAACAAGCTTCAGAAACTTGATATTTCTTCCAATGAAGTTTCTGGAAATATCCCATCTTCTCTGTTCTCTCTGCCTTCAATTCAGTATCTGAACTTTGCAGGCAACAAACTAAGTGGTTCCCTTTCAATGAACATTAGATGTGGTTCTTCACTGACTTTTGTGGATATCTCAAACAACCTTCTGGTGGGAAATTTGCCTTCCTGTATTGGGTCAACCTCAAAGTCTTCCAATCATGAGGTTTTGTATTCTGGGAATTGTTTGTCCATAAAAGGCTCAAGAGATCAACACCAAACTTCTTATTGCAAGAAAGAGGAAGCTTTAGCTGCTGAGCCTCTTGAAGGAAGCCAGAAAAAGTCAGATATGAGATTAGGCTTGATACTTGGTATAATTGGTGGGTCTGTAGGAATTTCAATGCTTTTAGCTCTGGTCATTCTTCTCATTTTGAGGAAGACCAAAACAGAGAGAGCTGATAATAATTACCTAGACAGATCTGTTGCTGATAAATCCCCTGTTCATGCATCCCCAAGGCCAAATACTGATACAAGACGAGTTCCTCAGACTACGAGGTTGCCGGCGATTGGATTTCAACCATACAGAATCTTTACATTAGAGGAAATAGAGGAGGCAGCAAACAATTTTGACCCATCAAATCTGATAGGAGAAAGAACAGAGGGACAGCAATATAAAGGACGGATCAGAGATGGGTCTGTGGTCCTGATTAACTGTGTAAAGCTAATGCACAAGAATGTGACCCAAAACCACATTGAGGTGCTCTCTAATTTGAGGCATAGGCATTTGGTAAGTGTTATTGGACACTGCCTGGTAGTTTCTCAGGGTCATCGTCAGACAACAAGCACAATCTTTCTTGTTTATGAACAATTCTCAAATGGGTCATTGAGGGATCATTTAACAGATTGGAGGAAGAAGGAAGTGCTGAAATGGCCACAAAGAATGGCGATTACCATAGGAATTGCGAGGGGAATCCAGTTCTTACATATAGGGGTTGTTCCTGGTATATTTGGCAATAACATGAGGATTGAGAAAATGCTTTTGGATGATAGTCTCAATGCAAAAGTTAGTGGATATAACGTTCCATTGTTATTCAATCATATCGACAGCACCGACAAAACCGCAGAAAAGGAAGATATATATCAATTTGGTGTTATTTTACTCGAAGTTATCACTGGCAAATCAATTTCTTCTGTCAATGAAGTAGAGGAGCTGAAAGACGAGTTAGAGAGAAGTTTATCAGAAGCAGCATCAGTACTTGGAGGAGTGACTGATCCCTCAATCAGGGGTAGTTATGCGTATGACTCAATGAGAACCGCAGTACAGATCACCATAAGTTGCCTCAGTAAAGTTCCAAGTACACGCCCTTCAATAGAAGATGTTCTCTGGAATTTGCAGTACTCGTTTCAGGTCCAGGAGAACTGGACCAGCAGTGGAAATCTCGGACTTGGTACCAGATTTTAG 2139 0.3969 MTVFWVSFFPYLLSAIFLVLLLIHNSTAQLTPSESRILFQVQKILEYPQVLQGWNNWTNFCYLPYSPSLQIVCSNNHVTELTIIGNKTSLSERFSIDSFITVLTKLSNLKVLSLVSLGLWGPLPVKLNRFRSLQVLNLTSNSIHGEIPPSISSMKTLKSLVLAGNLFNGTVPDLERLTSLEELNLGNNKLGPEFPSLPNNLVTLVLRNNSLRSKFPSKFNQFNKLQKLDISSNEVSGNIPSSLFSLPSIQYLNFAGNKLSGSLSMNIRCGSSLTFVDISNNLLVGNLPSCIGSTSKSSNHEVLYSGNCLSIKGSRDQHQTSYCKKEEALAAEPLEGSQKKSDMRLGLILGIIGGSVGISMLLALVILLILRKTKTERADNNYLDRSVADKSPVHASPRPNTDTRRVPQTTRLPAIGFQPYRIFTLEEIEEAANNFDPSNLIGERTEGQQYKGRIRDGSVVLINCVKLMHKNVTQNHIEVLSNLRHRHLVSVIGHCLVVSQGHRQTTSTIFLVYEQFSNGSLRDHLTDWRKKEVLKWPQRMAITIGIARGIQFLHIGVVPGIFGNNMRIEKMLLDDSLNAKVSGYNVPLLFNHIDSTDKTAEKEDIYQFGVILLEVITGKSISSVNEVEELKDELERSLSEAASVLGGVTDPSIRGSYAYDSMRTAVQITISCLSKVPSTRPSIEDVLWNLQYSFQVQENWTSSGNLGLGTRF 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1266 712 Coils Coil 624 644 - -
Alju12g1266 712 Gene3D Ribonuclease Inhibitor 31 335 IPR032675 -
Alju12g1266 712 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 201 328 - -
Alju12g1266 712 ProSiteProfiles Protein kinase domain profile. 435 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g1266 712 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 74 690 - -
Alju12g1266 712 MobiDBLite consensus disorder prediction 388 407 - -
Alju12g1266 712 Gene3D Transferase(Phosphotransferase) domain 1 516 704 - -
Alju12g1266 712 Pfam Leucine rich repeat 200 259 IPR001611 GO:0005515
Alju12g1266 712 SUPERFAMILY L domain-like 44 295 - -
Alju12g1266 712 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g02780 31 199 - -
Alju12g1266 712 Pfam Protein tyrosine and serine/threonine kinase 470 554 IPR001245 GO:0004672|GO:0006468
Alju12g1266 712 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 516 705 - -
Alju12g1266 712 Gene3D Phosphorylase Kinase; domain 1 408 514 - -
Alju12g1266 712 SUPERFAMILY Protein kinase-like (PK-like) 413 690 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1266 Alju-ChrAlju12 33758147 33761161 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1266 47 705 Miscellaneous Gene Families AT3G03770 40.303 3.96e-176 521
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Alju12g1266 PK_Tyr_Ser-Thr 1e-07 CL0016