Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1264 ATGGAAGAATATAATAAGGACCTAGAAATTGCATCAACTACGGTATTTGGTCCACTAATCAATGGAAGCTTAGGGTTCCGCTGCTTCATTTCGTGGTCGTGCCTCGCTCTAGCTTCTCCTTTGCCGAGTCGTTTTACACCCCAGCTTGGCTTAAGCGGGTTTGATACCCAAAACTCAGTTTCTGAAGCTCTGGTCTGTGCTGACATGGGAAAGACTCCTGGAAAATGGATCAAGGCCCTACTTTCGGGGAAGAAATCAAAGTCTCATTCATCAAAAAAGAAAGATTCCTTTAAACCTTCGAGTACCAAGGACTTGCTGGCAATGTCCTCTGAAATACATGTGTCTGATCCAATTGTGGATTCAGCACTGATATCCCAACTCACTTCTGGAGCTACTGCAACTAAGGAATCACTTTCTGAAAAGGGCTTAGTCAGTGAATTGTCTAACGACAGGGTTGCTATCTCAGATAGAGATGAAGAGACCAGTGCACAAGCTATTGTTGGTTTTGGTTTGCAGGATGATACTGAGAAAATCAGGCTAAACCAAGCTGCTACAAAAGCTCAGGCTGCTATTAGGGGCTATCAGGCTCGACGGTCATTTCAATCACTCAAAGGTGTCATAGAGCTGCAAGCCCTTATTCGTGGCAGCTTGGTCCGGAAACAAGCAGTAGCTACTTTATACTGTGTGAAAGGAATAGTTAAGTTTCAAGCGTTGGTTCGTGGTTACAAGGTTAGGCGTTCTGATATTGGTCTTGAAGTGCATAAAATTTGCAGGGGTACTGAATGTTTGATTGCTGTTGGAGCATCAACATCTAAGCAGACAGAAAAGCTGTCCAAAAGTGTCTTGGTTAACAAGCTTCTGGCTTCATCATCCTCTGTCTCTCCTCTATGTATCAACTATGATCCTGAACAACATAACTCGGCTTCAGACTGGCTTGGCCGGTGGACAAATTCTCACTTCTGGGCGCCTCATATGGGTCTGGGGTCAAAAACAACACTTGACTCGGTTTCTAATGAGAAAAATTGCAACAGTCAAACAGTTGAAAAGAAGGACGGCCTAGCTAAAAGAAATGCCCGGAAAAGTTCTGGTGTAAAAGTTAACTATGGTTCAGCTTCAGATTTAAACAAAAATAAACACCGTCCAAAAAAGGTTTCAGCTCACCCATTGCATTCAGGCCAAGAAAATACACAGAAGGAAGTTGATAAAAGTAATTTAAGAAAACCACTCAAGCAGCATGATTCTGATAGACCCGAGATTGTCAATGGGAAAGGAAAAGACATACTGAGAAAAGCATCTGGTCATACTGTCACTGATGTTTCAGAGAATGGACCAAATTTTTCTGCAGAAAAAACTAAAGATTCAGCTGTGTCAAAATCCAAACAGTCTGATCATGATCAAAGCCCTGTACAACAACCAGAAGATGAACATGATTCTCCCATAGCTAACTTGCCGTCTGGATTGAAGAACGGTAAAGGCGATGGTATTCAAGGAGTCAGTGAGGACTTGAATTGCATTACCGGCGTGAGCCCTAAGAATTGCCAGAGAAGAGCTTCACTGCCTGCTAAGTTTGACAGTCCAGATGACAGCATGCAAAAAACTCCGAGACTGCCCAGCTACATGGCCCCTACTGAATCTGCAAAGGCTAGGGTAAAAGGACAAGGCTCCCCTAGGCTTGTTGCTGAGTTGGTAGATAAAACTGGTCCAACCAGGCGGCATTCACTTTCATCTTCAGTCAATGGTAAGTTAGATTCACTTTCTCCACGACCAGAAAGACCGGGAGCTTTGAGCAGTAAGGGAGTAATAAGAACAGATAGATCTCTGTCATCTTCAAGGGATGGGAGTGAGAAGTTGATCCAACCTCAGTGGAGAAGGTGA 1875 0.4363 MEEYNKDLEIASTTVFGPLINGSLGFRCFISWSCLALASPLPSRFTPQLGLSGFDTQNSVSEALVCADMGKTPGKWIKALLSGKKSKSHSSKKKDSFKPSSTKDLLAMSSEIHVSDPIVDSALISQLTSGATATKESLSEKGLVSELSNDRVAISDRDEETSAQAIVGFGLQDDTEKIRLNQAATKAQAAIRGYQARRSFQSLKGVIELQALIRGSLVRKQAVATLYCVKGIVKFQALVRGYKVRRSDIGLEVHKICRGTECLIAVGASTSKQTEKLSKSVLVNKLLASSSSVSPLCINYDPEQHNSASDWLGRWTNSHFWAPHMGLGSKTTLDSVSNEKNCNSQTVEKKDGLAKRNARKSSGVKVNYGSASDLNKNKHRPKKVSAHPLHSGQENTQKEVDKSNLRKPLKQHDSDRPEIVNGKGKDILRKASGHTVTDVSENGPNFSAEKTKDSAVSKSKQSDHDQSPVQQPEDEHDSPIANLPSGLKNGKGDGIQGVSEDLNCITGVSPKNCQRRASLPAKFDSPDDSMQKTPRLPSYMAPTESAKARVKGQGSPRLVAELVDKTGPTRRHSLSSSVNGKLDSLSPRPERPGALSSKGVIRTDRSLSSSRDGSEKLIQPQWRR 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1264 624 Gene3D - 178 227 - -
Alju12g1264 624 ProSiteProfiles IQ motif profile. 180 208 IPR000048 GO:0005515
Alju12g1264 624 MobiDBLite consensus disorder prediction 394 432 - -
Alju12g1264 624 ProSiteProfiles IQ motif profile. 204 231 IPR000048 GO:0005515
Alju12g1264 624 MobiDBLite consensus disorder prediction 601 616 - -
Alju12g1264 624 MobiDBLite consensus disorder prediction 332 624 - -
Alju12g1264 624 MobiDBLite consensus disorder prediction 344 358 - -
Alju12g1264 624 PANTHER IQ-DOMAIN 5-RELATED 69 579 - -
Alju12g1264 624 SMART iq_5 179 201 IPR000048 GO:0005515
Alju12g1264 624 SMART iq_5 227 249 IPR000048 GO:0005515
Alju12g1264 624 SMART iq_5 203 223 IPR000048 GO:0005515
Alju12g1264 624 ProSiteProfiles IQ motif profile. 230 255 IPR000048 GO:0005515
Alju12g1264 624 Pfam IQ calmodulin-binding motif 182 201 IPR000048 GO:0005515
Alju12g1264 624 Pfam IQ calmodulin-binding motif 230 246 IPR000048 GO:0005515
Alju12g1264 624 Pfam Protein of unknown function (DUF4005) 527 598 IPR025064 -
Alju12g1264 624 MobiDBLite consensus disorder prediction 569 583 - -
Alju12g1264 624 MobiDBLite consensus disorder prediction 435 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1264 Alju-ChrAlju12 33741752 33747493 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1264 69 624 IQD Protein Family AT1G14380 35.117 2.91e-80 263