Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1260 ATGGGAGTTTGTTTAAGCACGAATTCTCTGAATCCCAATCACAAACCCAACCAGCCCTACAATAATATAGTTCATTCTCCTAATGGAAGACATGCCCACGTGGGAAGACCATGGATTCTCAATGAACAGAAGAATCTGTTTGTTGTTTCAGACAATCACAGAGTCATAATTCAAATGATTTGTGTGTCAGGAAAGAGGAAGAGAGACGAAAAGAAGAAATATATAGCTGACCCGAGGGATTTGCAGGCTCTGACAGTAGACAAGTTAAGATCTCAAATTCGCAATAAGCTCAAAAAGTTCTCCTATAAAGACATGGAAGATGCCACACGCAGGTTCAGAACTAAGAACTTGATTGGTCGAGGAGGTTTTGCTGATGTTTATAAGGGATATCTGTCACACTACATCATGAATGCTGCAAAACCAAATGAAGGATTCCCCATTGCTGTTAAGAGAATAAGAAGGCTTGGATCAGGAGGACACGAAGAATGGCTGAATGAAATAATATATTTGACCAAAATTAGCCATCCGAACGTGGTGAATCTAATAGGGTATTGCCGTGAGCGTCATCATAGAATGCTTGTGATTGAGTTCATGGTTGAAGGAAGCTTGGAGGACCATCTCTTGAAAGAAGACAGTAGAGAGCTAAACTGGAATAGAAGAATTAACATAGCACTTGGGGCTGCAAGGGCTTTAGACTTTCTTCACAGCTATGAAACACCAGTAATTCATCGTGATGTTAAATCTTCCAACATCCTGCTCGATGCTAACTTCAATGCAAAGCTCTCTGACTTCGGACTGGCTAGAGATGGACCTGAAGAAGATGACCAGTCCCATGTTTCCTCAAGAATCCTTGGCACTAGAGGCTATTTTGCCCCTGAGTACATAGCCACAGGGCATTTAACTCTAAAAGCTGATGTTTATAGCTTTGGAGTTGTTCTGCTTGAGATATTATCAGGCTCTATTGCAGTTAGGAAACATTCAAATGGGGTGGTGGGGAATCTTGCCCAGTGGGCTGAACCATTTCTAAGTAACAAAATTGAACTTCACCGTGTTATAGACAAGAGACTAGGACAAAATTTTCCTAAGGAAGGAGCCTATGAGTTGGCTAAACTAATCCTAAATTGCCTCTGCTTAGACCCCAAACATCGCCCAACAATGGCTGAGGTTGTTGCTGCCTTGGAACAGATAGAGCTTAACATGGGATTTCATTATAACAGAATGTTAAACAGAAGAACCAGAACTCATTTTTGTTCTCACTCTTGA 1263 0.4125 MGVCLSTNSLNPNHKPNQPYNNIVHSPNGRHAHVGRPWILNEQKNLFVVSDNHRVIIQMICVSGKRKRDEKKKYIADPRDLQALTVDKLRSQIRNKLKKFSYKDMEDATRRFRTKNLIGRGGFADVYKGYLSHYIMNAAKPNEGFPIAVKRIRRLGSGGHEEWLNEIIYLTKISHPNVVNLIGYCRERHHRMLVIEFMVEGSLEDHLLKEDSRELNWNRRINIALGAARALDFLHSYETPVIHRDVKSSNILLDANFNAKLSDFGLARDGPEEDDQSHVSSRILGTRGYFAPEYIATGHLTLKADVYSFGVVLLEILSGSIAVRKHSNGVVGNLAQWAEPFLSNKIELHRVIDKRLGQNFPKEGAYELAKLILNCLCLDPKHRPTMAEVVAALEQIELNMGFHYNRMLNRRTRTHFCSHS 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1260 420 PANTHER OS01G0588500 PROTEIN-RELATED 72 397 - -
Alju12g1260 420 Gene3D Transferase(Phosphotransferase) domain 1 198 411 - -
Alju12g1260 420 ProSitePatterns Protein kinases ATP-binding region signature. 118 150 IPR017441 GO:0005524
Alju12g1260 420 SMART serkin_6 112 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g1260 420 ProSiteProfiles Protein kinase domain profile. 112 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g1260 420 FunFam PTI1-like tyrosine-protein kinase 3 198 405 - -
Alju12g1260 420 SUPERFAMILY Protein kinase-like (PK-like) 93 402 IPR011009 -
Alju12g1260 420 Pfam Protein tyrosine and serine/threonine kinase 114 393 IPR001245 GO:0004672|GO:0006468
Alju12g1260 420 ProSitePatterns Serine/Threonine protein kinases active-site signature. 241 253 IPR008271 GO:0004672|GO:0006468
Alju12g1260 420 Gene3D Phosphorylase Kinase; domain 1 91 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1260 Alju-ChrAlju12 33578537 33581119 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1260 98 393 Glycoside Hydrolase AT3G07070 45.485 2.77e-79 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Alju12g1260 PK_Tyr_Ser-Thr 1.1e-50 CL0016