Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1259 ATGGGTAACTGTCTAGATTCTTCTGCCAAAGTAGATACAGCTCAGAGTTCTCGAACTTCTGGATCTGGAATTTCAAAAACTAGCCCTTCCTCTGCTGCACCTTCCACCTTATCACTTCCATCATTTAGTGAAAAAAGCAATGCCTCAAGTCTTCCCACACCAAGGTCTGAGGGTGAAATCTTGTCTTCTCCGAATCTAAAGGCCTTTACATTCAATGACCTAAAGAATGCCACCAGAAATTTTCGTCCTGATAGCCTTCTTGGCGAAGGTGGATTTGGGTATGTTTACAAGGGATGGATTGATGAACACACGTTCCAGGCTGCAAGACCTGGATCAGGCATGGTTGTTGCTGTGAAAAGGCTAAAACCTGAAGGCAGCTTTCAAGGTCACAAGGAGTGGTTGACTGAAGTTAACTACCTTGGGCAACTCCACCATGTGAATCTGGTTAAATTAATTGGGTACTGTTTGGAGGGAGAGAACCGGTTATTGGTCTATGAGTTTATGCCCAAAGGGAGCTTAGAAAATCATCTCTTTAGAAGAGGGCCTCAGCCACTCTCTTGGTCAGTGAGGATGAAAGTGGCCATTGGGGCTGCCAGAGGGCTATCTTTTCTCCATAACGCCAAATCGCAAGTCATATACCGGGATTTTAAAGCTTCAAACATCCTGCTAGATGCTGACTTCAATGCTAAACTCTCTGATTTTGGCTTAGCTAAGGAAGGTCCTACCGGCGATAAAACTCATGTGTCGACTCAAGTTATGGGCACTCATGGATATGCAGCTCCTGAATATGTGGCCACAGGTCGGTTGACAGCAAAGAGTGATGTCTATAGCTTTGGGGTTGTGTTGCTTGAACTTCTATCTGGACGGCGTGCAGTTGATAGATCAAAAGCTGGTGTGGAGCTAAATCTGGTAGATTGGGCAAAACCATATTTGGGTGACAAACGAAAACTTTTCCGGATTATGGACACCAAGTTGGAGGGCCAATACCCTCAAAAAGGAGCCTACACAGCCGCAACTCTTGCTCTACAATGCTTGAACGGTGAAGCCAAGGCAAGGCCTCCAATGACCGAGGTCTTAGCAACACTCGAACAGATCGAAGCTCCCAAGAATGCAGGCCGACACTCCCACTCAGAGCCACCGAGAGCCCATGTTCCTATAAGGAGCTCTCCTGCGCGAACCAGGTCCCCACTACATTTGACTCCAACTGCATCCCCATTGCCGGCTCACCGGCAAACTGCTCGTGTACACTGA 1251 0.4724 MGNCLDSSAKVDTAQSSRTSGSGISKTSPSSAAPSTLSLPSFSEKSNASSLPTPRSEGEILSSPNLKAFTFNDLKNATRNFRPDSLLGEGGFGYVYKGWIDEHTFQAARPGSGMVVAVKRLKPEGSFQGHKEWLTEVNYLGQLHHVNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWSVRMKVAIGAARGLSFLHNAKSQVIYRDFKASNILLDADFNAKLSDFGLAKEGPTGDKTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRRAVDRSKAGVELNLVDWAKPYLGDKRKLFRIMDTKLEGQYPQKGAYTAATLALQCLNGEAKARPPMTEVLATLEQIEAPKNAGRHSHSEPPRAHVPIRSSPARTRSPLHLTPTASPLPAHRQTARVH 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1259 416 ProSitePatterns Serine/Threonine protein kinases active-site signature. 211 223 IPR008271 GO:0004672|GO:0006468
Alju12g1259 416 MobiDBLite consensus disorder prediction 369 416 - -
Alju12g1259 416 ProSitePatterns Protein kinases ATP-binding region signature. 87 119 IPR017441 GO:0005524
Alju12g1259 416 FunFam Serine/threonine-protein kinase BIK1 48 167 - -
Alju12g1259 416 Gene3D Phosphorylase Kinase; domain 1 57 167 - -
Alju12g1259 416 MobiDBLite consensus disorder prediction 1 59 - -
Alju12g1259 416 ProSiteProfiles Protein kinase domain profile. 81 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g1259 416 FunFam Probable serine/threonine-protein kinase PBL8 168 381 - -
Alju12g1259 416 Gene3D Transferase(Phosphotransferase) domain 1 168 382 - -
Alju12g1259 416 PANTHER OS01G0588500 PROTEIN-RELATED 43 366 - -
Alju12g1259 416 Pfam Protein tyrosine and serine/threonine kinase 85 361 IPR001245 GO:0004672|GO:0006468
Alju12g1259 416 CDD STKc_IRAK 87 365 - -
Alju12g1259 416 SUPERFAMILY Protein kinase-like (PK-like) 52 362 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1259 Alju-ChrAlju12 33575535 33578226 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1259 57 362 Glycoside Hydrolase AT3G07070 52.104 3.52e-108 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Alju12g1259 PK_Tyr_Ser-Thr 3.4e-47 CL0016