Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1257 ATGAGGAAGCTGAAGCAGCAGCTGGGTAAGCAAGAAGAATCTCAGAAGAAGGAGCGTCATATTGTGACGTGGACACAAGAGGAAGATGATATATTGAGGAAGCAGATAAGCATCCATGGAACTGAGAATTGGGCAATAATTGCATCAAACTTCAAAGACAAAACGACAAGACAGTGCCGAAGAAGGTGGTACACTTACTTGAACTCTGATTTCAAGAAAGGGGGATGGTCACCAGAGGAAGACTTGCTCTTATGTGAGGCTCAGAAAATATTTGGCAACAGATGGACAGAAATAGCAAAGGTGGTTTCAGGCAGAACGGATAACGCTGTCAAAAACCGTTTCTCCACTCTCTGCAAGAAGAGAGCAAAATTTGAGGCCTTGGCAAAAGAGAATAACACTTCATTCACTAATTCAAATAATAAAAGGACTATTTTACAACAGGGTGATAACATAGAGTCAACATCTGAGGCTGCACCGCCTGCTAAGAAAATGAGGAGAGCTCATATCCCTGATGCTGCAGAGAAGATCAACTATGGAGACAGGTCCCATAAGCATTATGAAGCAACAATAAAACAGCAGCCAAGAGCGCCGTTTTCTATTTTGGCTCAGAATTTGCCAGATCAGCATGAAGCCTCCAATGACAAGATCAGCAGAAATGCCCATAATTCCAAGACTCAAGGAACATTTCTTAAAGAGGATGATCCAAAGATTAGCGTGTTGATGCAACAAGCGGAGTTATTAAGTTCACTAGCTCTAAAAGTTAATACAGATGATGTGGACCAGAGTCTTGAAGACGCATGGAAGGTACTTCAAGAGTTTCTGAGCCAAACCAAAGAATCAGACATTCTCAAATATAAGATTTCGGATTTACAGCTCGTAGATCTTAAATATATGATGGAGGAATTTAAGAGTAGTAATGAGGGAAGCCAGCAATGTTGGAGGCAACCAGAACTATATGAAGACTCTCCAAGCAGTTCTGAATACAGCACAGGATCAACTCTTCTTCCCCATTCAGCAAGTGATAATCTGGAACACTCTCTGCTTCAGGATATTGAAACTGATCTAAAGCCTATCCAACTTGGAGATCAAAAAGTAGTTAGTGAATGTAGGAAAGAGGATCTCTCTTCTGCAACTGTAGGTCAAGTGGCAGATGTGTTTCCATCCTGTGAGGAACATATAAGCAATGATGGGATTGCTTCTACCTCATCAAGCACAGAGTTCAGTTCCCCTCTTCAAGTTACCCCTATGTTCAGATCTTTGGCTGCAGGAATTCCCAGCCCACAGTTTTCAGAAAGTGAAAGGAACTTCCTAATAAGGACGCTTGGATTGGAGTCCCCATCCATGAACCCAAATGCCAACCCCTCACTACCACCACCCTGCAAAAGAGCCCTACTACACAGTCTATAA 1407 0.4236 MRKLKQQLGKQEESQKKERHIVTWTQEEDDILRKQISIHGTENWAIIASNFKDKTTRQCRRRWYTYLNSDFKKGGWSPEEDLLLCEAQKIFGNRWTEIAKVVSGRTDNAVKNRFSTLCKKRAKFEALAKENNTSFTNSNNKRTILQQGDNIESTSEAAPPAKKMRRAHIPDAAEKINYGDRSHKHYEATIKQQPRAPFSILAQNLPDQHEASNDKISRNAHNSKTQGTFLKEDDPKISVLMQQAELLSSLALKVNTDDVDQSLEDAWKVLQEFLSQTKESDILKYKISDLQLVDLKYMMEEFKSSNEGSQQCWRQPELYEDSPSSSEYSTGSTLLPHSASDNLEHSLLQDIETDLKPIQLGDQKVVSECRKEDLSSATVGQVADVFPSCEEHISNDGIASTSSSTEFSSPLQVTPMFRSLAAGIPSPQFSESERNFLIRTLGLESPSMNPNANPSLPPPCKRALLHSL 468
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1257 468 ProSiteProfiles Myb-like domain profile. 24 67 IPR001005 -
Alju12g1257 468 FunFam Transcription factor MYB124 16 72 - -
Alju12g1257 468 PANTHER MYB PROTEIN-RELATED 23 183 - -
Alju12g1257 468 Gene3D - 11 72 - -
Alju12g1257 468 CDD SANT 76 117 IPR001005 -
Alju12g1257 468 SUPERFAMILY Homeodomain-like 20 114 IPR009057 -
Alju12g1257 468 SMART sant 72 120 IPR001005 -
Alju12g1257 468 SMART sant 20 69 IPR001005 -
Alju12g1257 468 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 68 122 IPR017930 -
Alju12g1257 468 Gene3D - 75 149 - -
Alju12g1257 468 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 16 67 IPR017930 -
Alju12g1257 468 ProSiteProfiles Myb-like domain profile. 68 118 IPR001005 -
Alju12g1257 468 CDD SANT 23 67 IPR001005 -
Alju12g1257 468 Pfam Myb-like DNA-binding domain 24 83 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Alju12g1257 Alju-ChrAlju12 33541004 33545593 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1257 62 468 MYB Transcription Factor Family AT1G14350 51.951 9.39e-137 397
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Alju12g1257 Myb_DNA-bind_6 4.8e-15 CL0123