Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1244 ATGATCATGGAGGAGGCAGATCATTCTAATGGGATCCGTAGACCCAATTTCCCACTTCAGCTTTTGGAGAAGAAAAATGGTGATCAACAGCGACACGATGATGATGGTAGTGGCGGTGACCCGACCCGAACCAATAGTAACATCCAGCTTGCCGACCAATCCAAGAAGCCGCCTCCGAAGCGGGCCTCCACTAAGGACAGGCACACGAAAGTGGAAGGTCGGGGCCGTCGGATCCGTATGCCGGCGGCTTGTGCTGCCAGAGTTTTTCAGCTGACCAAGGAGCTCGGCCATAAGTCCGATGGCGAGACCATCGAGTGGCTGCTCCAACAGGCCGAACCCGCCGTGATCGCCGCCACCGGGACCGGGACCATTCCCGCCAATTTCACTTCCCTTAACATCTCCCTCCGCAGTTCCGGCTCGACCGTGTCGGCGCCGTCGCAATACTTTAGGGGTAATAGTTATAGTAATTACTTCAGTCCCAGCTTGTTCTCTTCATCGTTGCAGTTGAGAAACACGGTGGCGGCGGATGATTCTAGAAGGATCTTGTTTCCCGAGAATTCTTCGATGAATAATAATTTCAGTTCTGCGAGCAATGTGAATGCCATGTTACAACTATCAAAGCAAGAGCTGAGAGAAGAATCTGGAGGCGGCGGCGGCGGCGGCCTTGAATCGACGACGACGACAGAAACCGAAGGAAGTTTAGGGAAAAAGAGACGGTCATCACCAGAACAGGATCAGGAACTACCACAGAATAATAATCAGATGAGCAGTTATTTGTTACAATCCAGCACAGGCTCAATTCCGGCGAGTCATTCATCGGTTCCGGCGACGTTTTGGATGGTAAGTAATAGCCCCGCCGGAAACAACCAATCCATAGTCAGCAGTGGCAACGGCAACGGCAACGGCGGAAGCAGTAGTGGTGGCGGCGATCCGATATGGGCAATTCCTTCTGTTGGTAATTACAGTAACATGTATAGAGGAGCCATGTCTAGCAGTGGGATTCATTTCATGAATTTCGGTTCTCCAATGGCTCTTATGGGTGGAGCTCAATTAGGAGGTACAGTGATGAATGAAAGCAACTTAGGCATGCTCGCAGCCCTGAATGCGTACAGGCAGATTCCGGCGAGCGGCTTTTCAGAGTCTCCGGCGATCACTGGGCACGGAGGAGGAGGAGGAGGGACCAAGAGAGACAGAGATGGGGAGATGAAAGAGAAGAATAATGATGAGGAAGAGGGTTTTGAATTGGAAGGTGTTAAGCTTAATTATCATCAGGTGGGTGGTGAGCCCCATGGGTTTTGGCCATTTTCCCTAAACTCCATATACAAACTCTGCCACCACTGCACTGTACCCTTCCCTCTTTCTCCTTCTCATACTAACAACCACAGAGCAACTAGCTAG 1398 0.5114 MIMEEADHSNGIRRPNFPLQLLEKKNGDQQRHDDDGSGGDPTRTNSNIQLADQSKKPPPKRASTKDRHTKVEGRGRRIRMPAACAARVFQLTKELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSTVSAPSQYFRGNSYSNYFSPSLFSSSLQLRNTVAADDSRRILFPENSSMNNNFSSASNVNAMLQLSKQELREESGGGGGGGLESTTTTETEGSLGKKRRSSPEQDQELPQNNNQMSSYLLQSSTGSIPASHSSVPATFWMVSNSPAGNNQSIVSSGNGNGNGGSSSGGGDPIWAIPSVGNYSNMYRGAMSSSGIHFMNFGSPMALMGGAQLGGTVMNESNLGMLAALNAYRQIPASGFSESPAITGHGGGGGGTKRDRDGEMKEKNNDEEEGFELEGVKLNYHQVGGEPHGFWPFSLNSIYKLCHHCTVPFPLSPSHTNNHRATS 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1244 465 MobiDBLite consensus disorder prediction 58 76 - -
Alju12g1244 465 MobiDBLite consensus disorder prediction 210 252 - -
Alju12g1244 465 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 36 386 IPR005333 GO:0003700
Alju12g1244 465 ProSiteProfiles TCP domain profile. 64 118 IPR017887 -
Alju12g1244 465 MobiDBLite consensus disorder prediction 25 39 - -
Alju12g1244 465 Pfam TCP family transcription factor 63 247 IPR017887 -
Alju12g1244 465 MobiDBLite consensus disorder prediction 1 76 - -
Alju12g1244 465 MobiDBLite consensus disorder prediction 380 412 - -
Alju12g1244 465 MobiDBLite consensus disorder prediction 392 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1244 Alju-ChrAlju12 33342938 33345154 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1244 54 357 TCP Transcription Factor Family AT3G47620 43.529 1.17e-53 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Alju12g1244 TCP 1.1e-36 No_clan