Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1219 ATGGCTGAGTGTCGCATTTGTCAAGAGGAGGATAGCGTTAAGAATTTGGAGACTCCTTGTGCATGTAGCGGCAGCCTAAAGTTCGCTCATAGAAAGTGCGTTCAACATTGGTGCAATGAAAAGGGAGATATAATATGTGAGATATGTCATCAGCCTTATCAACCAGGTTATATTGCCCCACCACCTCGTCCCCAACCTGAAGAAACTACCATCGACATAGGTGGGGGCTGGACAATCTCTGGCACACCTTTGGACTTGCGTGATCCTCGACTGCTGGCAATTGCTGAGGCTGAACGGCAATTCTTGGAAGCTGAATATGATGAGTATGCTGCTTCTAATGCCAGTGGAGCAGCATTTTGTCGCTCTGCTGCTTTAATTCTAATGGCTCTATTACTCTTGCGGCATGCACTTTCAGTTACAGATTCCGATGCTGATGATGATCCATCTACTTTTTTCTCTCTTTTCTTGCTTAGGGCGGCTGGATTTCTTTTACCCTGCTACATCATGGCTTGGGCAATCAGCATTTTGCAACGTCGGCGACAAAGACAAGAGGCAGCCGCATTGGCAGCGACCCAAGTTGCTTTTGTATTACAATCTGGACAGCGTAGGGGCCTGCAATTTGCCATAGCACCAGCTGCACCCACACTGAATTCACAACAGGAGCATGTGTAG 672 0.4747 MAECRICQEEDSVKNLETPCACSGSLKFAHRKCVQHWCNEKGDIICEICHQPYQPGYIAPPPRPQPEETTIDIGGGWTISGTPLDLRDPRLLAIAEAERQFLEAEYDEYAASNASGAAFCRSAALILMALLLLRHALSVTDSDADDDPSTFFSLFLLRAAGFLLPCYIMAWAISILQRRRQRQEAAALAATQVAFVLQSGQRRGLQFAIAPAAPTLNSQQEHV 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1219 223 CDD RING_CH-C4HC3_MARCH 4 50 - -
Alju12g1219 223 SMART ringv_2 3 50 IPR011016 GO:0008270
Alju12g1219 223 Pfam Protein of unknown function (DUF3675) 55 173 IPR022143 -
Alju12g1219 223 PANTHER RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING 2 183 IPR033275 -
Alju12g1219 223 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 58 IPR013083 -
Alju12g1219 223 SUPERFAMILY RING/U-box 3 54 - -
Alju12g1219 223 Coils Coil 92 112 - -
Alju12g1219 223 ProSiteProfiles Zinc finger RING-CH-type profile. 1 56 IPR011016 GO:0008270
Alju12g1219 223 Pfam RING-variant domain 4 49 IPR011016 GO:0008270
Alju12g1219 223 FunFam RING/FYVE/PHD zinc finger protein 1 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1219 Alju-ChrAlju12 33115743 33118737 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1219 3 49 C3H Transcription Factor Family AT2G37950 42.000 2.13e-06 45.1