Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1210 ATGAAGGCAGCTTGGAGGAACTGTCTGGTATATTCTTCAAAAGAACACTCCAATAGTGCTCTTACCTCTTGTGATCTCTCGTCTTCTTCGATGGGGATGGTTTATGCAGACATGGGTTCTCTTTCTCTTTCTTCTTCTTCTTCGGAAAGGGGAAATAACAACAACAATATTGGGGGAACCAGCTGGCCTACTTTTCCCTTTATTACTAGGGATCATCATCATCTTCTTCCCAACAACAACACCGATAATGACAACGATATTGCTTTGGAGTGTAAAGCTTCTGATCAATCTAGTACTGATCAGGACAATCTTATCATAGATCACACCCAAGAAAACCCTAATGAGAATTCTTCTGGTGTTAGTACTGGAAAAGTAGAAGCTGATTCTGGGCAGTCCAAGCTTTGTGCACGAGGCCATTGGAGACCTGCTGAAGACGCCAAGCTTAAAGAGCTTGTCGCTCTCTATGGCCCTCAGAACTGGAACCTCATTGCGGAAAAATTAGAAGGAAGATCAGGTAAGAGCTGTAGGCTGAGGTGGTTCAACCAGTTAGATCCGAGGATAAACCGGAGGGCGTTTACTGAGGAAGAAGAGGATAGGCTAATGCAGGCACATAGGATATATGGGAACAAATGGGCCATGATTGCTAGATTATTCCCAGGAAGAACTGATAATGCAGTGAAGAATCACTGGCATGTTATAATGGCCAGGAAGTACAGAGAACAATCTAGTGCTTACAGAAGGAGAAGGTTAAGTCAGCCTACAAGTTACACAAGATCGTCAATGGAGGACCAAAATGCAAGCTCAGTCACTGAACAACCACCACCGCCTCCTCCACCTTATTGTCTTGTCCCCAACAATAACAACAACATAATGGCTAGTTTCCCATATGGTCACTTACATGGAGCTAATGGTGGAGTTGACTACGGCTTCTGTAATATTGCTTCACCCCACATGGCTGGTGCATTACAAGCATTATCTAGCAGCAGCAGCAAGCAGGCCCCTCATACTCATCACACAACTTTTTATGCTCATCATCCTCATCCTTCATCTTTTGATGTCATCTCTGGTGTTAGAGGCAATGACATGATATATCGGGAAAACAGGCCAAGTGATTATGAACTTCATAATTCTCTTAATGGCTTCTTCTACCCTCATCAAGAAGATAATTTCAACCCATATTTGATGCCAATAATGAAGCAGCAGCAGCAACCACCACAGTCAAACTCAAACATTATGAATCACGGTTTTCACAGCTTCTCATCATCAAGTTCCATGGCTCCAAATGTTTCCTCCGGCGAACCATCGTCGTCAGAGAACAGAGATAAAGTACTGACTCATCCTTCTCCTCCATTTATCGACTTTCTCGGAGTTGGAGCCACATAA 1383 0.4353 MKAAWRNCLVYSSKEHSNSALTSCDLSSSSMGMVYADMGSLSLSSSSSERGNNNNNIGGTSWPTFPFITRDHHHLLPNNNTDNDNDIALECKASDQSSTDQDNLIIDHTQENPNENSSGVSTGKVEADSGQSKLCARGHWRPAEDAKLKELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFTEEEEDRLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSSAYRRRRLSQPTSYTRSSMEDQNASSVTEQPPPPPPPYCLVPNNNNNIMASFPYGHLHGANGGVDYGFCNIASPHMAGALQALSSSSSKQAPHTHHTTFYAHHPHPSSFDVISGVRGNDMIYRENRPSDYELHNSLNGFFYPHQEDNFNPYLMPIMKQQQQPPQSNSNIMNHGFHSFSSSSSMAPNVSSGEPSSSENRDKVLTHPSPPFIDFLGVGAT 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1210 460 ProSiteProfiles Myb-like domain profile. 137 183 IPR001005 -
Alju12g1210 460 FunFam MYB transcription factor 190 262 - -
Alju12g1210 460 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 137 183 IPR017930 -
Alju12g1210 460 MobiDBLite consensus disorder prediction 247 269 - -
Alju12g1210 460 Pfam Myb-like DNA-binding domain 189 232 IPR001005 -
Alju12g1210 460 Pfam Myb-like DNA-binding domain 137 183 IPR001005 -
Alju12g1210 460 Gene3D - 137 188 - -
Alju12g1210 460 Gene3D - 190 265 - -
Alju12g1210 460 ProSiteProfiles Myb-like domain profile. 184 234 IPR001005 -
Alju12g1210 460 SMART sant 188 236 IPR001005 -
Alju12g1210 460 SMART sant 136 185 IPR001005 -
Alju12g1210 460 MobiDBLite consensus disorder prediction 400 448 - -
Alju12g1210 460 CDD SANT 140 181 IPR001005 -
Alju12g1210 460 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 184 238 IPR017930 -
Alju12g1210 460 CDD SANT 191 231 IPR001005 -
Alju12g1210 460 PANTHER MYB PROTEIN-RELATED 137 293 - -
Alju12g1210 460 MobiDBLite consensus disorder prediction 243 283 - -
Alju12g1210 460 MobiDBLite consensus disorder prediction 400 443 - -
Alju12g1210 460 FunFam MYB transcription factor 137 188 - -
Alju12g1210 460 SUPERFAMILY Homeodomain-like 137 230 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1210 Alju-ChrAlju12 33034772 33036509 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1210 31 249 MYB Transcription Factor Family AT1G69560 52.479 7.72e-76 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Alju12g1210 Myb_DNA-binding 1.7e-14 CL0123