Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1207 ATGGATATGCAAAACTTGCAAAACCAAAGTATGCATTTGGTTCTGTCCACTGATGCAAAGCCTAGGCTGAAATGGACTCCTGAGCTTCACCAAAGATTTCTTGACGCCATTAAACAGCTTGGAGGGCCAGATAAGGCAACACCCAAGAGTCTTTTGAGAGTGATGGGCATTCCAGGGCTTACTCTGTACCACCTGAAGAGCCACTTACAGGCATTTCCCTTTTTTTTGTGCAATGATTGTATCCTGTCATTATTTGCTCTTTTTGATGGATCTGCAATTCAGGCAGCTAAATCTTTATCAGTTTTCTGTTCCTGGTTACAGAAATTCAGGCTTGGAAAAAGCCAGCGACTAGAAACCTGTTCTGACAGTAAACAAGATGGCCTGTCCTCTAATGCCCTATTTCTTGCAGACCACAGAGAAATCCAGAGCAGTGTCAGCCATTGCAAAAGGGAAATCTGTATTAGGACCCAGAATCAGATGACTGACTTGCAGATAGCTCAGGCTCTTCAAATGCAAATGGAAGCACAGGGAAAACTTTATGAACAACTTGAGGTGCAGAGGCATTTGCAGCTTCGAATTGAAGCTCAAGGGAAGTATTTACAATCAGTGCTCAAGAAAGCACAGGAAACACTTGCTGCTTATAGTTCTTCTTCCACTTCTGGTACACAACTTGCAAAAGCCGAGCTTTCTCGGTTAGTGTCCACGATCAACAATGCTGTTCCTAGTTCTCCGATCTCAGAACTGACAGAAACAAGAGGGTTGAGTTCTAAAGATGGGAAGAGGAAGCAAAGCAGAGGGATTATGTGTTCACTGGAAAGTTCCTTGACATCTTCTGAGAGCTCAGGAATAAAAGAAGACAAGCAGCAGCCCAAAGATGAAACAGGAGACCTTCAAAAATCTAATAGTACCACTTCAGTTGAACTTCCATTAATGGCTTTTCGTTCAGTGGATGAAGCATTAAATGGGGATGCAAGTGATGAATCTAGTGGGAGAAGGAGAAGTGGAGGAGCCAATTATGATGGGGAAACATGTGTTAACAAGCAGAGAAAAATTGAATTGTCAGAAATGCTTGACTTGAACAGGCAATACCAGAGTGATATTGATTTGAATCACTGTTAA 1119 0.4236 MDMQNLQNQSMHLVLSTDAKPRLKWTPELHQRFLDAIKQLGGPDKATPKSLLRVMGIPGLTLYHLKSHLQAFPFFLCNDCILSLFALFDGSAIQAAKSLSVFCSWLQKFRLGKSQRLETCSDSKQDGLSSNALFLADHREIQSSVSHCKREICIRTQNQMTDLQIAQALQMQMEAQGKLYEQLEVQRHLQLRIEAQGKYLQSVLKKAQETLAAYSSSSTSGTQLAKAELSRLVSTINNAVPSSPISELTETRGLSSKDGKRKQSRGIMCSLESSLTSSESSGIKEDKQQPKDETGDLQKSNSTTSVELPLMAFRSVDEALNGDASDESSGRRRSGGANYDGETCVNKQRKIELSEMLDLNRQYQSDIDLNHC 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1207 372 MobiDBLite consensus disorder prediction 320 342 - -
Alju12g1207 372 Coils Coil 166 186 - -
Alju12g1207 372 Gene3D - 19 73 - -
Alju12g1207 372 NCBIfam myb-like DNA-binding domain, SHAQKYF class 20 72 IPR006447 GO:0003677
Alju12g1207 372 Pfam MYB-CC type transfactor, LHEQLE motif 163 210 IPR025756 -
Alju12g1207 372 Pfam Myb-like DNA-binding domain 22 70 IPR001005 -
Alju12g1207 372 MobiDBLite consensus disorder prediction 267 283 - -
Alju12g1207 372 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 5 296 IPR044848 GO:0003700
Alju12g1207 372 MobiDBLite consensus disorder prediction 241 308 - -
Alju12g1207 372 SUPERFAMILY Homeodomain-like 19 74 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1207 Alju-ChrAlju12 33003022 33004535 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1207 11 322 G2-like Transcription Factor Family AT1G69580 45.679 1.18e-64 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Alju12g1207 Myb_DNA-binding 3.2e-06 CL0123