Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1206 ATGGCTTCTGAATCCAATGTTTCTGAGAATTCGTCCCTCTTTGAAAGCTTGTTCAGATTCAGAGAACTCTCTGTTTTCTTACCCTTCATTTTAGGCTTCTCCACCGATTCTTCTTCAAGACAAGACAATCAAGACCCAAATCAGGAAGCCACAAATTCAGAAAATAGTAATAATACCCATGGCGAGAGAGAAAGAGTGATCTTGATCAACCCCTTTACGCAGGGCATGGTGGTGATTGACGGTACTTCGAGCCTCGAGACTCTGTTCCAAGAAATTGGCATGAAAAGTGGGCATCCGCCGGCGTCGAAGGAGTCTATAGAGGCGATGCCGAGTGTGGAAATCGGAGAAGGAGAAGGCGGCGGCGAGTGTGTGATTTGTTTGGAGGAATGGGAGGTTGGTGGGGTGGCGAAAGAGATGCCTTGCAAGCACAAGTTTCATCAGAATTGCATAGAGAAGTGGTTGGGAATTCATGGGTCTTGCCCTGTTTGTAGATACCAGATCCCTGTGGCTGAGAAAGAAGCAGGCAAGAGAGATGAAGAAGAAGAACAAGAAGAAGCAGAAGGAGGAGAGAGAAGGAGGGTTGGCAGAGAAATTTGGGTGAGCTTCAACTTTAGAAGTGAGAATTCAAACCAAGCTCCTTCTGATAATTCTAGTGATGCTTCATCAAGTCCAAGAGGTGATTCTGAGGTAGAGAATTAG 699 0.4592 MASESNVSENSSLFESLFRFRELSVFLPFILGFSTDSSSRQDNQDPNQEATNSENSNNTHGERERVILINPFTQGMVVIDGTSSLETLFQEIGMKSGHPPASKESIEAMPSVEIGEGEGGGECVICLEEWEVGGVAKEMPCKHKFHQNCIEKWLGIHGSCPVCRYQIPVAEKEAGKRDEEEEQEEAEGGERRRVGREIWVSFNFRSENSNQAPSDNSSDASSSPRGDSEVEN 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1206 232 MobiDBLite consensus disorder prediction 37 63 - -
Alju12g1206 232 MobiDBLite consensus disorder prediction 172 192 - -
Alju12g1206 232 ProSiteProfiles Zinc finger RING-type profile. 123 164 IPR001841 -
Alju12g1206 232 Pfam Ring finger domain 122 164 IPR001841 -
Alju12g1206 232 MobiDBLite consensus disorder prediction 204 225 - -
Alju12g1206 232 MobiDBLite consensus disorder prediction 37 57 - -
Alju12g1206 232 MobiDBLite consensus disorder prediction 204 232 - -
Alju12g1206 232 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 40 168 - -
Alju12g1206 232 FunFam E3 ubiquitin-protein ligase RNF181 89 170 - -
Alju12g1206 232 SUPERFAMILY RING/U-box 122 169 - -
Alju12g1206 232 SMART ring_2 123 163 IPR001841 -
Alju12g1206 232 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 89 170 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1206 Alju-ChrAlju12 33000741 33001439 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1206 1 204 C3H Transcription Factor Family AT1G26800 47.847 6.03e-59 183