Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1190 ATGCTTGCAGCTCCACCAAACGACAAGCACGCCCTCAAGCTTAAAAGCCCCATTCCTCTCCTTTCAAACATTTCAAACGCCCTCCTTCTTCTTCACCCACCATTAACAATGGAACAAGATCTCCCTCCTGGCTTCAGGTTTCATCCCACTGATGAAGAACTCATCGTCTTCTACCTTCTTAACCAGTACAGATCAAAGCCATGTCCTGCTTCTATCATCCCAGAAGTTGATATCTATAAATCCGATCCTTGGGACTTGCCTGAGAAAGCAGAGTTTGGAGAGAAGGAAAGGTATTTCTTTAGCCCTCGAGATAGAAAGTACCCTAATGGAGTGAGACCTAACAGAGCCACTGTGTCTGGGTACTGGAAGGCGACTGGTACAGATAAGGCCATACATAGTAGGGGGTCCAAGCTTATTGGGTTGAAGAAAGCTCTGGTTTTCTACAAAGGGAAACCACCAAAAGGAATCAAGACTGGTTGGATCATGCATGAGTATAGACTCGTTGAATCCAGAACATCACAGGCCAACAAACATGTTGGGACCATGAGATTGGATGACTGGGTTCTGTGCAGGATCTACAAGAAGAAGAATATGGGGAAGACAATAATGGAGGAGAAACAGGAATTTCCCAGTAGTAGTACTGAGAATGGTAATGAAACAATTAGAGGAAATAATTATCATCAGAATGAGAAAGAAAGGATGAAGCTTCTTCTTCCAAGGACTTTTGATAATTGTCCGGGATCATCAGTTTCACAGATATTTTCCGATGGACTTTATAATTATTCAACCTTTGATCTTCAAAATCAAGCTTCGATGACCAATTCTGAAATAGTAGACTACTCCTTTGTCAAACCTCAGATATTTCAAGACCATAATTATTATGCAGGGAAGTTTCAAGTGATGAAACAAAGTAGCAGCATGAACAGCAACCCCCAGCCAATGTTTATGAGCCAAGTGTATGATCTGTGGGGATGTATATGA 981 0.42 MLAAPPNDKHALKLKSPIPLLSNISNALLLLHPPLTMEQDLPPGFRFHPTDEELIVFYLLNQYRSKPCPASIIPEVDIYKSDPWDLPEKAEFGEKERYFFSPRDRKYPNGVRPNRATVSGYWKATGTDKAIHSRGSKLIGLKKALVFYKGKPPKGIKTGWIMHEYRLVESRTSQANKHVGTMRLDDWVLCRIYKKKNMGKTIMEEKQEFPSSSTENGNETIRGNNYHQNEKERMKLLLPRTFDNCPGSSVSQIFSDGLYNYSTFDLQNQASMTNSEIVDYSFVKPQIFQDHNYYAGKFQVMKQSSSMNSNPQPMFMSQVYDLWGCI 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1190 326 Gene3D NAC domain 50 200 IPR036093 GO:0003677|GO:0006355
Alju12g1190 326 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 37 267 - -
Alju12g1190 326 Pfam No apical meristem (NAM) protein 42 167 IPR003441 GO:0003677|GO:0006355
Alju12g1190 326 MobiDBLite consensus disorder prediction 206 224 - -
Alju12g1190 326 FunFam NAC transcription factor 50 199 - -
Alju12g1190 326 SUPERFAMILY NAC domain 33 195 IPR036093 GO:0003677|GO:0006355
Alju12g1190 326 MobiDBLite consensus disorder prediction 206 228 - -
Alju12g1190 326 ProSiteProfiles NAC domain profile. 41 195 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1190 Alju-ChrAlju12 32775217 32776934 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1190 35 298 NAC Transcription Factor Family AT1G69490 55.351 1.40e-95 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Alju12g1190 NAM 2.1e-37 No_clan