Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1185 ATGGTGAAGTCATCATCGGAACAAGTAGGGTTGAAGAAAGGGCCATGGAATCCTAAGGAAGACCAGAAGCTCGTGGCTTATATTCAACAACACGGCGCTCATGGAAGCTGGTCTTCCTTGCCTGCAAAAGCTGAGAACTCAGCATCACCACAACAAAACTTGGGAGTGTCAAGTGTTGGGGATGATTGGGAATCCATTCTTTACCTCATCAATGGTTCGCCTCCTGTTTTCCCTGAGTTGTGA 243 0.4733 MVKSSSEQVGLKKGPWNPKEDQKLVAYIQQHGAHGSWSSLPAKAENSASPQQNLGVSSVGDDWESILYLINGSPPVFPEL 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1185 80 Pfam Myb-like DNA-binding domain 13 43 IPR001005 -
Alju12g1185 80 SUPERFAMILY Homeodomain-like 8 43 IPR009057 -
Alju12g1185 80 ProSiteProfiles Myb-like domain profile. 8 67 IPR001005 -
Alju12g1185 80 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 44 - -
Alju12g1185 80 CDD SANT 15 43 IPR001005 -
Alju12g1185 80 Gene3D - 10 72 - -
Alju12g1185 80 MobiDBLite consensus disorder prediction 36 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1185 Alju-ChrAlju12 32560984 32562629 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1185 5 44 MYB Transcription Factor Family AT3G01140 67.500 1.66e-13 61.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Alju12g1185 Myb_DNA-binding 8.4e-06 CL0123