Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1184 ATGGTGAAGTCATGCAGCGATAAACAAGTAGGGTTAAAGAAAGGACCGTGGACTCCTGAGGAAGACCAGAAGATCATGTCTTACATTCAACAACACGGCCATGGAAGTTGGTCTTCCTTGCCTGCTAAAGCTGGTAATAATCACTCTACTCTACTACCTCTTGTTTCAAACATATGGTTCATGAATCTGTTTCAAAAACCACCTCGTACATTCCTGGGTGTAAAGGAATATATATGCGTAATGCTTTTATGTTTTGATGACCAAAAGGACTCCGGAGATGTGGCAAAAGCTGTAGGCTGA 300 0.42 MVKSCSDKQVGLKKGPWTPEEDQKIMSYIQQHGHGSWSSLPAKAGNNHSTLLPLVSNIWFMNLFQKPPRTFLGVKEYICVMLLCFDDQKDSGDVAKAVG 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1184 99 CDD SANT 16 46 IPR001005 -
Alju12g1184 99 Gene3D - 11 70 - -
Alju12g1184 99 Pfam Myb-like DNA-binding domain 14 49 IPR001005 -
Alju12g1184 99 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 4 46 - -
Alju12g1184 99 SUPERFAMILY Homeodomain-like 10 43 IPR009057 -
Alju12g1184 99 ProSiteProfiles Myb-like domain profile. 9 49 IPR001005 -
Alju12g1184 99 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 12 46 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1184 Alju-ChrAlju12 32540055 32540354 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1184 5 45 MYB Transcription Factor Family AT3G01140 75.610 1.89e-17 73.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Alju12g1184 Myb_DNA-binding 2.5e-08 CL0123