Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1168 ATGAGCTCCAACGCGTCCACCGGTGGCGGTGGTTCTTCCAGCGGCTCTTCATCGGCGGCGGGCAGGAACAAGAAGAGGGAGAAGGCTAAAGTGAGTCGCACTTCAATGATACTATGGCATTCGCATCAAAACGACGCCGCCGCTGTTCGGAAGCTTCTGGAGGAAGATCCGTTGCTTGTGATGGCCAGAGACTACGATAATCGAACTCCACTTCATGTGGCTTCCCTCCATGGTTGGATTGACGTTGCTAAGTGCTTGATTGAATTTGGCGCCGATATTAACGCTCAGGATCGTTGGAGAAACACTCCTCTAGCTGATGCTGAAGGGGCTAAAAAGTATGGCATGATGGAGCTCTTAAAATCACACGGAGGCTTGTCTTATGGCCAAAGAGGAAGCCACACTGAACAGAATTCCGTTGCACCCCCATTGTCTAACAAGTGTGATTGGGAAGTCGACCCTACTGAGCTGGACTTCTCACATTCAGCTCGTATTGGAAAGGGATCTTTTGGTGAGATTTTAAAAGCCCATTGGCGTGGGACACCAGTTGCTGTCAAACGCATTCTTCCATCTCTTTCAGATGATAAATTAGTGGTCCAGGACTTCAGGCATGAGGTTAATTTGTTAGTGAAGCTTCGACACCCAAATGTAGTCCAGTTTCTTGGAGCTGTTACCGAGAAGAAACCTCTTATGCTAATTACTGAATATCTTAGAGGGGGCGATCTTCATCAGCATCTCAAGGAAAAAGGTTCAATTAGTCCATCGACTGCTGTCAGCTTTGCTTTAGATATTGCCAGAGGGATGGCCTATCTTCATAACGAACCAAATGTTATAATCCATCGAGACCTTAAGCCAAGGAATGTTCTTTTAGTCAATTCTAGCGCAGAGCATTTAAAAGTTGGAGATTTTGGACTGAGCAAGCTTATCAAGGTCCAGAGTTCTCATGACGTTTACAAGATGACGGGTGAAACTGGAAGCTACCGGTATATGGCTCCTGAAGTATTCAAACACAAGAAATACGATAAGAAGGTTGATGTCTTCTCCTTTGCAATGATACTATATGAGATGCTCGAAGGTGAACCGCCTTTTGCAAATTTTGAGCCTTATGATGGAGCCAAACATGTGGCAGAAGGAGACAGACCAACTATGAAGGCAAAGGGTTATATCCCTGAACTGCGAGAGTTAACAGAACAGTGCTGGGCAGCTGATTACCATCAAAGACCTTCCTTCTTGGAGATCCTTAGACGACTTGAGAAGATCAAAGAAAATCATCTACCTTCAGATCATTCCTGGAAATTGTTCTCTTCCTAA 1308 0.4534 MSSNASTGGGGSSSGSSSAAGRNKKREKAKVSRTSMILWHSHQNDAAAVRKLLEEDPLLVMARDYDNRTPLHVASLHGWIDVAKCLIEFGADINAQDRWRNTPLADAEGAKKYGMMELLKSHGGLSYGQRGSHTEQNSVAPPLSNKCDWEVDPTELDFSHSARIGKGSFGEILKAHWRGTPVAVKRILPSLSDDKLVVQDFRHEVNLLVKLRHPNVVQFLGAVTEKKPLMLITEYLRGGDLHQHLKEKGSISPSTAVSFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSAEHLKVGDFGLSKLIKVQSSHDVYKMTGETGSYRYMAPEVFKHKKYDKKVDVFSFAMILYEMLEGEPPFANFEPYDGAKHVAEGDRPTMKAKGYIPELRELTEQCWAADYHQRPSFLEILRRLEKIKENHLPSDHSWKLFSS 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1168 435 MobiDBLite consensus disorder prediction 1 20 - -
Alju12g1168 435 Pfam Protein tyrosine and serine/threonine kinase 161 416 IPR001245 GO:0004672|GO:0006468
Alju12g1168 435 Gene3D Phosphorylase Kinase; domain 1 150 237 - -
Alju12g1168 435 FunFam Integrin-linked protein kinase family 237 433 - -
Alju12g1168 435 MobiDBLite consensus disorder prediction 1 33 - -
Alju12g1168 435 ProSitePatterns Protein kinases ATP-binding region signature. 164 185 IPR017441 GO:0005524
Alju12g1168 435 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 51 421 - -
Alju12g1168 435 CDD STKc_MAP3K-like 164 416 - -
Alju12g1168 435 SUPERFAMILY Protein kinase-like (PK-like) 157 422 IPR011009 -
Alju12g1168 435 ProSitePatterns Serine/Threonine protein kinases active-site signature. 277 289 IPR008271 GO:0004672|GO:0006468
Alju12g1168 435 ProSiteProfiles Ankyrin repeat profile. 66 98 IPR002110 GO:0005515
Alju12g1168 435 ProSiteProfiles Protein kinase domain profile. 158 431 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g1168 435 SMART ANK_2a 66 95 IPR002110 GO:0005515
Alju12g1168 435 Gene3D - 10 133 IPR036770 -
Alju12g1168 435 ProSiteProfiles Ankyrin repeat region circular profile. 66 98 - -
Alju12g1168 435 SMART serkin_6 158 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g1168 435 PIRSF ILK 1 435 - -
Alju12g1168 435 FunFam serine/threonine-protein kinase STY46-like 151 237 - -
Alju12g1168 435 SUPERFAMILY Ankyrin repeat 36 123 IPR036770 -
Alju12g1168 435 Gene3D Transferase(Phosphotransferase) domain 1 238 432 - -
Alju12g1168 435 Pfam Ankyrin repeats (many copies) 52 104 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1168 Alju-ChrAlju12 32303702 32308599 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1168 1 435 MAP Kinase Kinase Kinase AT1G14000 78.507 0.0 717
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Alju12g1168 PK_Tyr_Ser-Thr 6.6e-64 CL0016