Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1164 ATGGAAGAGACAGAGGAGTCTAATGGCAAGAAGAAATTCACAGCCCAGAGAAGAAGGAGCGTAGGAGCAAACTCTGATGAGCATTATTATTATTATCAGAATCAGTTTGGTGGGTTATTGTGTAACCAGAATAATAACAAGTATCAGAGGTATTGTCCTGCTCTTCTTCCTCCACCTTCTCTTTTACCTCTGCAACTAGCTTTAACTCCACCGTTTCCTCAAAACCAAACCTTCAAATCCAAAACCCATTTTCAGAAATATCCATGCAAACTCAATCACAATTCTCCTCCCTTGGCTGCTTCCTCAGACAACAACAAGAAGCTATCAGAAGAATCCACCGTTTCTCCTGCTCAGGTGGGGCTTCTTCAACTTCAAACTAAAGCGAAGACATACCTTAAAGGAGATGAAGGGAAGAAATTTATTCCTGCAAGAAAACCACAGACATTAATTGCTGCAAAAAGACCAGACTCTGGTGGCAAAGAAGGTTCGGTGATCTCTCTTCTCGCCAACCACTTCCTCGTGCAATTCGATCCATCTCAAAAGATATACCATTACAATGTTGAAATCACCCCAAATCCCTCCAAGGAAGTTGCCAGAGAAATCAAACAGAAATTGGTCAACAACAATTCTGTGGGTTTTTCTGGTGCTGTGCCTGCATATGATGGGAGGAAGAATCTTTACAGCTCAGTGGAATTCCAAAATGATAAGCTTGAGCTCTACATAAGCCTTCCAATCCACTCAACCAAATCGTCAGCTTTAGCTTATGGAGAGATCTATGACTTGAAAGAGAAGAAAGAACAGCTTAAACTGTTTAGGATAAATATCAAATTAGTTTCTAAGATCAATGGGAAGGAGTTGAGTAACTACTTGAGCAAAGAGGGAGATGATTGGGTCCCACTTCCACAGGATTATCTTCATGCTTTGGATGTAGTTTTGAGGGAGAACCCGACCGAGAAGTGTGTACCCGTAGGCAGATCATTTTACTCAAGTTCAATGGGAAAAACCAGGGATATTGGAGGAGGAGCTGTTGGATTTAGAGGGTTCTTTCAGAGTCTTAGGCCAACACAACAAGGACTTGCCCTCAATGTAGATTTCTCTGTGACTGCTTTCCATGAGAGCATAGGAGTTATTCCATATTTGCAGAAGCGACTCGAGTTTCTTCGAGATCTTTCTCAAAGGAAGACAACAAGTTTAACTGGTGAAGAAAGGAAGGAAGTGGAGAAAGCATTGAAGAACATCAGGGTCTTTGTTTGCCATAGAGAAACCGTGCAGAGATACCGTGTCCATGGCTTAACCGAAGAAGCTACAGAGAATCTTTGGTTTGCTGATAGGGATGGAAAGAATTTAAGGCTTGTGACTTACTTCAAAGATCACTATAACTATGACATTCAGTTCAGAAAATTGCCATGCTTGCAAATTAGTAGGAGTAAACCATGTTATCTTCCTATGGAGCTTTGTGTGATCTGTGAAGGTCAGAAATTTCTTGGTAAGTTGTCTGATGATCAGACAGCAAAGATATTGAAGATGGGCTGCCAAAGACCAAGAGAACGAAAAGCCATCATCGAAGGAGTCATGAGAGGGAATGTAGGTCCTACCAGTGGCAACCAGGAAGGAGAATTTAAACTCAAAGTGTCACGCGAAATGACAAGGCTAACCGGGAGGATTCTTCACCCTCCCAAGCTAAAGCTCGGCGATGGAGGTCGGGTAAGAAACATATTTCCTTCGCGCCATGACCGCCAGTGGAACCTTCTTGATGGCCATGTCTTTGAAGGAACTAAAATTGAAAGATGGGCACTAATAAGTTTTGGTGGCACACCTGAGCAGAAGTCTAATATCCCTAGATTCATAAACCAGCTATCTCAAAGGTGTGAACAATTGGGAATTTTCCTTAACAAGAAAACAATCATTAGCCCTCAGTTTGAATCAAGCCATGTGCTTAACAATGTTAACCTTTTGGAATCTAAGCTCAAGAAAATCCAGAGATCTGCCTCAAACAATCTCCAGCTTCTTATTTGCATAATGGAGAAAAAACACAAAGGTTATGCTGACCTGAAACGGATCGCTGAGACTAGTGTTGGGGTTTTAAGTCAATGTTGCTTGTATCCAAATCTCATCAAGCTAAGTTCACAGTTTTTGGCTAATGTGGCCTTAAAAATCAATGCCAAAGTTGGTGGGTGCACAGTTGCTCTTTACAATTCACTTCCTTCTCAAATCCCAAGACTGTTTCAGGTCGATGAGCCGGCCATTTTCATGGGTGCTGATGTAACACATCCTCATCCACTCGACGATTTCAATCCATCTATTGCCGCGGTTGTTGGCAGCATGAACTGGCCAACAGCGAACAAGTACATCTCAAGAATAAGGTCTCAGACACACAGACAAGAGATCATCCAGGATCTTGGTGCAATGGTGGGTGAGTTGCTTGATGATTTTTATCAGGAAGTAAAGAAACTTCCTGGGAGAATAATTTTCTTCAGAGATGGGGTTAGTGAAACACAGTTTTATAAAGTTCTTGAAGAGGAATTGCAATCCATCAGAGTGGCATGTTCCAAATTTCCTGATTACAAACCATTAATTACTTTCGCGGTAGTACAGAAGAGGCACCATACAAGGTTGTTTCCTGCTGAAACAGACCAATCCTCGGATCAAAACCATTTCTCGTACGAGAATATTCCCCCGGGGACTGTGGTTGATTCCGTGATCACTCACCCGAAAGAATTTGATTTCTATCTGTGCAGCCACTGGGGCGTGAAAGGAACAAGCAGACCAACTCATTACCATGTTCTGTGGGATGAAAACCAGTTCACTTCTGATGAACTACAGAAGCTGGTTTACAACTTATGTTACACTTTTGTGAGGTGCACCAAGCCAATTTCTTTGGTCCCACCTGCTTATTATGCACATTTGGCAGCTTACAGAGGAAGACTTTACCTAGAGAGATCATCAGAGTCTTCGGGTTTATGCAGAAGTTCATCTACACTATCAAGAGCTGCCCCTCCAAAGACAGTACCTCTTCCAAGACTCAGTGAAAACATCAAGAAGCTCATGTTCTACTGCTAA 3060 0.4222 MEETEESNGKKKFTAQRRRSVGANSDEHYYYYQNQFGGLLCNQNNNKYQRYCPALLPPPSLLPLQLALTPPFPQNQTFKSKTHFQKYPCKLNHNSPPLAASSDNNKKLSEESTVSPAQVGLLQLQTKAKTYLKGDEGKKFIPARKPQTLIAAKRPDSGGKEGSVISLLANHFLVQFDPSQKIYHYNVEITPNPSKEVAREIKQKLVNNNSVGFSGAVPAYDGRKNLYSSVEFQNDKLELYISLPIHSTKSSALAYGEIYDLKEKKEQLKLFRINIKLVSKINGKELSNYLSKEGDDWVPLPQDYLHALDVVLRENPTEKCVPVGRSFYSSSMGKTRDIGGGAVGFRGFFQSLRPTQQGLALNVDFSVTAFHESIGVIPYLQKRLEFLRDLSQRKTTSLTGEERKEVEKALKNIRVFVCHRETVQRYRVHGLTEEATENLWFADRDGKNLRLVTYFKDHYNYDIQFRKLPCLQISRSKPCYLPMELCVICEGQKFLGKLSDDQTAKILKMGCQRPRERKAIIEGVMRGNVGPTSGNQEGEFKLKVSREMTRLTGRILHPPKLKLGDGGRVRNIFPSRHDRQWNLLDGHVFEGTKIERWALISFGGTPEQKSNIPRFINQLSQRCEQLGIFLNKKTIISPQFESSHVLNNVNLLESKLKKIQRSASNNLQLLICIMEKKHKGYADLKRIAETSVGVLSQCCLYPNLIKLSSQFLANVALKINAKVGGCTVALYNSLPSQIPRLFQVDEPAIFMGADVTHPHPLDDFNPSIAAVVGSMNWPTANKYISRIRSQTHRQEIIQDLGAMVGELLDDFYQEVKKLPGRIIFFRDGVSETQFYKVLEEELQSIRVACSKFPDYKPLITFAVVQKRHHTRLFPAETDQSSDQNHFSYENIPPGTVVDSVITHPKEFDFYLCSHWGVKGTSRPTHYHVLWDENQFTSDELQKLVYNLCYTFVRCTKPISLVPPAYYAHLAAYRGRLYLERSSESSGLCRSSSTLSRAAPPKTVPLPRLSENIKKLMFYC 1019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1164 1019 SMART PAZ_2_a_3 381 521 IPR003100 GO:0005515
Alju12g1164 1019 SMART DUF1785_2 321 373 IPR014811 -
Alju12g1164 1019 Gene3D - 741 1019 IPR036397 GO:0003676
Alju12g1164 1019 ProSiteProfiles Piwi domain profile. 669 979 IPR003165 GO:0003676
Alju12g1164 1019 SMART Piwi_a_2 669 979 IPR003165 GO:0003676
Alju12g1164 1019 MobiDBLite consensus disorder prediction 92 112 - -
Alju12g1164 1019 FunFam protein argonaute 10-like 737 1019 - -
Alju12g1164 1019 SUPERFAMILY Ribonuclease H-like 654 979 IPR012337 -
Alju12g1164 1019 CDD PAZ_argonaute_like 384 489 - -
Alju12g1164 1019 Pfam Piwi domain 670 976 IPR003165 GO:0003676
Alju12g1164 1019 Gene3D - 555 731 - -
Alju12g1164 1019 FunFam Argonaute 10 555 731 - -
Alju12g1164 1019 CDD Piwi_ago-like 539 978 IPR045246 -
Alju12g1164 1019 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 146 980 - -
Alju12g1164 1019 FunFam Protein argonaute 7 368 494 - -
Alju12g1164 1019 Pfam Argonaute linker 1 domain 322 371 IPR014811 -
Alju12g1164 1019 ProSiteProfiles PAZ domain profile. 381 490 IPR003100 GO:0005515
Alju12g1164 1019 Gene3D paz domain 367 494 - -
Alju12g1164 1019 SUPERFAMILY PAZ domain 368 526 IPR036085 GO:0005515
Alju12g1164 1019 Pfam PAZ domain 384 506 IPR003100 GO:0005515
Alju12g1164 1019 Pfam N-terminal domain of argonaute 165 312 IPR032474 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1164 Alju-ChrAlju12 32254391 32258115 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1164 90 1019 Eukaryotic Initiation Factors Gene Family AT1G48410 40.515 0.0 647