Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1158 ATGCGTGGAACTGGTGATCAACTACCACCGTCGTCGGACCCTCCTCCGCCGCCACGCAACTCCATGGATACGCTTTTCAACGGTGTTTCCTCTGGCGGTGCCGGCTTTGGATTCAGCAGCCCCGGTCCTATGACTCTGGTTTCCAATTTCTTCAACGAGAACGACGACTTCAAGTCCTTCTCTCAACTTCTCGCCGGCACTATGCCGCCGTCTCCATTGGCGACGGATGGTGGCGCCAGCAGCACTGGGCTTAAGCAGTATAGGCCTTCTTCTGCTGAGCAGTCGCCGCCGATGTTCATGGTTGGCCCCGCCGGCTTCATCGGTGCCCCAAGACTTTTTCCAGCTTCTCAGGTCTCGGCTCAGGCGGTGCCAGTCAACGAGCATACATCATCGACGGCGACGGTGGCGGCTTCCTTCGCTAAACAAGTTGACATGCCGAGGAGCTCAATTCCAGATTCCGGCACGACGTCAATGAAGGAATGTCCTGATGATGGATTCAACTGGCGCAAGTATGGGCAGAAACAGGTGAAAGGAAGTGAATTTCCTAGGAGTTATTACAAGTGCACGCATCCGAGCTGTCCCGTGAAGAAGAAGGTGGAGAGATCGGTCAACGATGACCATGTGGTGGCCATCATTTACAAAGGACAACATAATCATCAAGCTCCTCGCCCTACGAACAGGGACCAGTTATCAGCGGCTGAACATGAAGCAGAAGGATTAAGTGAGAGTGATGAGGAAGATGCTGAAGTGGAGGAGAAAAATGATGAGCCTGACCTAAAGAAGAGGAGGCAAGAAGGTATGGCTTGTGAGGGGATGAGCTCACAACATAGGACAGCCATGGAGCCAAGGATCATTGTGCAGACAACAAGCGAAGTTGACCTGCTAGACGATGGGTATAGATGGCGAAAATATGGCCAAAAAGTTGTTAAAGGCAATCCTTTCCCAAGGAGTTACTACAAGTGTACAACCACAGGTTGCAATGTTCGGAAGCATGTTGAGAGAGCATCATCAGATCCAAAAGCTGTCATAACAACGTATGAAGGAAAACACAATCACGACGTACCAGCAGCTAAAACAAACAGCCACACCATCGCCAACAACTCTGCATCATCACAGCTCAGACCCCACAATTCCACAATACCAGACAGACTTAGTTTCAACCAGCAGCAGCAGCAGCAACATCAGCCTGTGGCACGTCTTAGGTTGAAGGAAGAACAGATAACCTAG 1227 0.5102 MRGTGDQLPPSSDPPPPPRNSMDTLFNGVSSGGAGFGFSSPGPMTLVSNFFNENDDFKSFSQLLAGTMPPSPLATDGGASSTGLKQYRPSSAEQSPPMFMVGPAGFIGAPRLFPASQVSAQAVPVNEHTSSTATVAASFAKQVDMPRSSIPDSGTTSMKECPDDGFNWRKYGQKQVKGSEFPRSYYKCTHPSCPVKKKVERSVNDDHVVAIIYKGQHNHQAPRPTNRDQLSAAEHEAEGLSESDEEDAEVEEKNDEPDLKKRRQEGMACEGMSSQHRTAMEPRIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPFPRSYYKCTTTGCNVRKHVERASSDPKAVITTYEGKHNHDVPAAKTNSHTIANNSASSQLRPHNSTIPDRLSFNQQQQQQHQPVARLRLKEEQIT 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1158 408 Gene3D WRKY domain 150 223 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju12g1158 408 Gene3D WRKY domain 280 356 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju12g1158 408 MobiDBLite consensus disorder prediction 69 95 - -
Alju12g1158 408 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 240 380 IPR044810 GO:0003700
Alju12g1158 408 MobiDBLite consensus disorder prediction 1 34 - -
Alju12g1158 408 FunFam WRKY transcription factor 33 282 348 - -
Alju12g1158 408 SMART WRKY_cls 295 354 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju12g1158 408 SMART WRKY_cls 162 221 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju12g1158 408 FunFam WRKY transcription factor 151 223 - -
Alju12g1158 408 Pfam WRKY DNA -binding domain 296 353 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju12g1158 408 Pfam WRKY DNA -binding domain 163 220 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju12g1158 408 ProSiteProfiles WRKY domain profile. 290 355 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju12g1158 408 SUPERFAMILY WRKY DNA-binding domain 160 222 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju12g1158 408 MobiDBLite consensus disorder prediction 214 276 - -
Alju12g1158 408 SUPERFAMILY WRKY DNA-binding domain 287 355 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju12g1158 408 MobiDBLite consensus disorder prediction 69 93 - -
Alju12g1158 408 MobiDBLite consensus disorder prediction 239 253 - -
Alju12g1158 408 ProSiteProfiles WRKY domain profile. 157 222 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1158 Alju-ChrAlju12 32211655 32214217 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1158 17 408 WRKY Transcription Factor Family AT2G03340 46.004 6.92e-114 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Alju12g1158 WRKY 4.9e-26 CL0274