Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1131 ATGGAGGAAAAGAAGTTCGTTTGCAAGTATTGCAACAAGAAGTACCCATGTGGGAAGTCTCTTGGTGGACACATCAAGACTCATATGACTGCTAAACATTATTCATCGCTTCAATCTAAGGAAGTTAGAACCAATAATGCCGATGATAGTGTCGTGAAGTTCGATGGCGGAAGAAGGAAGAGGAAGAGAGATTTTGGGTCTGAAGAAGAAGAAGAAGAAGAAGCTGCTTCTGGAAACCCCATTTATGGTCTTCGAGAGAATCCCAAGAAAACAACGAGGTTCGTACATTCCAACGTTGTTAATGTTGTTGCTGCTACACAACAACAACATGGGAGGTTCTGCAAAGAATGTGGGAAAGGCTTTTTGTCTCTGAAAGCTCTCTGTGGCCACATGGCTTGTCATTCGGAGAAAGATAAAGGGATGATGAACAATTCTGGGTTTAGCATGAAGCCGAAATTGGTGGTGGATAGCCAATCGGACACTGAAACATCATCTTCTCCGAATCATCCTAGGAGATCCCGAAGAATGAGGTTCAAGACCGTGAATACTGATAAAAACGATCATCACCCTTCTTTTGTTTCTTTGGCGAATGGTTCTTCCTCTGTATCTGAGGTTGAGCAGGAACAAGAAGAGGTCGCTAGGTGTTTGATGTTATTATCCAAAGACACTAGCCATAAGGGTCGTTTTGTTTTGCCCACTGAATCTTCCGACAACAATTCTGTTGTGGTAGAGGCAAAATCACCGTCTGTGGACACGATTATTACTTTAAAGAATGGTAAGAAAAGCTCTGTGTCTAATGGTTTTGAGATGGTGAAGAAGAAGGTGGTGCAGTATAATAATGGCATTAAGTTGAAGAAGTCTGCTGAGATTGTCGATCCTGATGATTCAGATTCCGAGTATTTCAGAAATGGTCCCAAAAAGTTGGAATTTTCAATTGATGGGTATCCTAGGAATGGGGAATTCAAGACACCAAAAGTGGAACTCAGGTCTGGGTGTGAGTTTGATCAGAGCTATGATGCTGAATTGAGGAATAAGATGCCAATTACGAACAGAGGAAGAACCAGAAGCACTGAACCCAGAAAGCTAATTTTGGAGGATTTGGACTCCAATAAAATAACAGATGGATCGACAAGGGAAGAGTTAATCAATTGGAGAAAGAGGCCAAGATATGATGATTCTCTTTGCCAAAACAATTCAGTTGGTGTTTCTAGCAAAAGGACACCAAATGGTTTTCACAGTGAGCTGCCATTGAAGCCCCCAGAGAGCTTAAATAGTGAACAAGTTATTATCAATGGCTCTCAGGATTCAGTAGATGAGAGTGATGAAAGCAGCACAGACACTGATGCTTATACTGCTCCGAGAACTCATAGCAGCTGCAAGGTCATCAATGGAAAGAAGGAAGGCAAGTTCAAGAAGAAACTGAAGTTGAAGAAAAGTAGGGACCATGAATGCCCAATCTGCTACAAAAAATTTAAGTCAGGCCAAGCTCTAGGAGGTCACAAGAGGTCTCATTTTATTGGAGGTTCTGAAGAAGACAACAAAGTAGTGGTGATCAAACAAGAAAACCCTCCTGTGGTTCCATGCTTGATTGATCTCAATCTACCTGCTCCCATTGATGATTAG 1623 0.4177 MEEKKFVCKYCNKKYPCGKSLGGHIKTHMTAKHYSSLQSKEVRTNNADDSVVKFDGGRRKRKRDFGSEEEEEEEAASGNPIYGLRENPKKTTRFVHSNVVNVVAATQQQHGRFCKECGKGFLSLKALCGHMACHSEKDKGMMNNSGFSMKPKLVVDSQSDTETSSSPNHPRRSRRMRFKTVNTDKNDHHPSFVSLANGSSSVSEVEQEQEEVARCLMLLSKDTSHKGRFVLPTESSDNNSVVVEAKSPSVDTIITLKNGKKSSVSNGFEMVKKKVVQYNNGIKLKKSAEIVDPDDSDSEYFRNGPKKLEFSIDGYPRNGEFKTPKVELRSGCEFDQSYDAELRNKMPITNRGRTRSTEPRKLILEDLDSNKITDGSTREELINWRKRPRYDDSLCQNNSVGVSSKRTPNGFHSELPLKPPESLNSEQVIINGSQDSVDESDESSTDTDAYTAPRTHSSCKVINGKKEGKFKKKLKLKKSRDHECPICYKKFKSGQALGGHKRSHFIGGSEEDNKVVVIKQENPPVVPCLIDLNLPAPIDD 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1131 540 SUPERFAMILY beta-beta-alpha zinc fingers 2 35 IPR036236 -
Alju12g1131 540 MobiDBLite consensus disorder prediction 424 438 - -
Alju12g1131 540 ProSiteProfiles Zinc finger C2H2 type domain profile. 112 139 IPR013087 -
Alju12g1131 540 ProSitePatterns Zinc finger C2H2 type domain signature. 8 28 IPR013087 -
Alju12g1131 540 MobiDBLite consensus disorder prediction 395 455 - -
Alju12g1131 540 MobiDBLite consensus disorder prediction 395 410 - -
Alju12g1131 540 ProSiteProfiles Zinc finger C2H2 type domain profile. 6 33 IPR013087 -
Alju12g1131 540 SMART c2h2final6 112 134 IPR013087 -
Alju12g1131 540 SMART c2h2final6 482 504 IPR013087 -
Alju12g1131 540 SMART c2h2final6 6 28 IPR013087 -
Alju12g1131 540 Pfam C2H2-type zinc finger 114 136 - -
Alju12g1131 540 Pfam C2H2-type zinc finger 6 29 - -
Alju12g1131 540 Pfam C2H2-type zinc finger 482 504 - -
Alju12g1131 540 MobiDBLite consensus disorder prediction 155 200 - -
Alju12g1131 540 MobiDBLite consensus disorder prediction 56 87 - -
Alju12g1131 540 ProSiteProfiles Zinc finger C2H2 type domain profile. 482 504 IPR013087 -
Alju12g1131 540 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 1 539 - -
Alju12g1131 540 ProSitePatterns Zinc finger C2H2 type domain signature. 484 504 IPR013087 -
Alju12g1131 540 SUPERFAMILY beta-beta-alpha zinc fingers 113 504 IPR036236 -
Alju12g1131 540 ProSitePatterns Zinc finger C2H2 type domain signature. 114 134 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1131 Alju-ChrAlju12 31957146 31958768 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1131 1 540 C2H2 Transcription Factor Family AT1G26610 37.943 4.06e-83 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Alju12g1131 zf-C2H2_6 4.3e-10 CL0361