Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1130 ATGGACCCCGATATATTTTCCTGGATACTAGAGTTTCTCCTCAGGAGTTCCGTTCCAGATTTACTCCTCAAGAAAGTTTTGAAAAGTTTGCCTCTCTCTCGCATCGATTCGCGGCTATGGAAAACATTGGCTCTCAGATCTATTCAATCCGAGGTAGCTATGCCATCATTTACAGAAAACTCATTGGAATGTCTGGAGGTCATTGAAGAAATCGACAGACTTGATGGCATTGCAATCACACAAGCCATGAAGGAGGCATACTGTGCTGTTGCTGTGGAATGCAGTGTCAGGCACCTTGAGGCATGCCCAGATAAGAACACCCGCGGCTTGTTTGACGATGCTATCAATAGGATTTGGAGGGGCCGTGTTCGGCAAATGATGGAGGCGATGGCGTTAGGGAGGAGGAGTAACTTATTTACGCCGGAGTTGATAGGGTGGAAGGATCTCTTAGAGTCTGCACGTTGGGACGCGAAGGTGTGCGGGAGATTAATGAACATGAATACCAGACAAAATGCAATCGATAAGGTTAGGGTTTATCTAAAAGAAACTTGGGAATCCATGGGCCCTTCTTTTCTTGAGTTAGCAGATATATTGTCGCAAGACAAGTGTTTGGGAAGTTCAAGGGGAGATCAGATGGGTGACGCGGAGCTTGCTGCTAATATACCCAATGAAGGTTGTGACAGGGGTGTTTCTGAATCTGTCTTGGTCTCTGATCAGATGAATATGTGTAAAGAAGGGCTACATTGTTCAACTAACACGACTCAGGAGGGTTTAGTTGTGTCTGATGGAAGTGCATTGAATAATGCTGCAATCTGCATGGAGAAGGCGCCAGTGGCAGGTGGGAATCAAGAAAGTGAGCAATTGGGAAAGAGAGTCTTGCCTCAAAGGATAAATGAAGCAATTCAAAAGGGCAAGCTGCCACTTGAATGTAATCATGCTGCGCCTTCTACATGTAGAGGAATTAAGATTATTGATGCTGAGGAAGAAGGGCCAGCGACAGTGTGTAGCAAAGATCACAATGCATCTAATATTCAAGTTGAAAAACTTCGGAAATCTCTCATGTCAAGTTCTTTGGAGTTGCGAGCACTGGTGAAGGATCCTCTTCCTGATGCATTACATAAATCTGACATTGTAAGATCTGAATTAGCAACAAAGGGTGTGGATCATGAGCCTCCTTTAGAAAACCAGAGTACAGTTGTAAATGTGCCAGAACAAAATACTTGCAGGAGCATTGTGCTTTATCAACCTATCAGTGATATTTTAAAGAAACAGTCTGCTGCTAATTGCAGTAATGTCCAACGTCCCAGCTTGATGGAACGAAATAGTACCGCCCGTACTTTTGAGTGGGATGATCCATTTAATGACTTGCCTGGGGGAAGCCCTAAGAAAAGGAGGAGAAAGGCAAGATGGAGTTCTGAAGAAGAGGATGCATTAAGGGATGGTGTAAAGAAGTTTGGTAAAGGAAACTGGAAGCCAATCCTAAGATTTCACAGTGAGATATTTGCAAAGGCAGGAAGAACAGAAGTTGATTTGAAGGATAAATGGAGAAATTTGACTCGCTTTGGAGCTGAGACAGATCCTGATTATCAAATTGACAGGGGATCTAAGGCTGTTTTAATAAAATCTGTTATCTCAAGTAAAGTTCAGCAAGAAACTGCATCTTTTCTCTTGAGATATGGTGACAAGAAATGA 1692 0.432 MDPDIFSWILEFLLRSSVPDLLLKKVLKSLPLSRIDSRLWKTLALRSIQSEVAMPSFTENSLECLEVIEEIDRLDGIAITQAMKEAYCAVAVECSVRHLEACPDKNTRGLFDDAINRIWRGRVRQMMEAMALGRRSNLFTPELIGWKDLLESARWDAKVCGRLMNMNTRQNAIDKVRVYLKETWESMGPSFLELADILSQDKCLGSSRGDQMGDAELAANIPNEGCDRGVSESVLVSDQMNMCKEGLHCSTNTTQEGLVVSDGSALNNAAICMEKAPVAGGNQESEQLGKRVLPQRINEAIQKGKLPLECNHAAPSTCRGIKIIDAEEEGPATVCSKDHNASNIQVEKLRKSLMSSSLELRALVKDPLPDALHKSDIVRSELATKGVDHEPPLENQSTVVNVPEQNTCRSIVLYQPISDILKKQSAANCSNVQRPSLMERNSTARTFEWDDPFNDLPGGSPKKRRRKARWSSEEEDALRDGVKKFGKGNWKPILRFHSEIFAKAGRTEVDLKDKWRNLTRFGAETDPDYQIDRGSKAVLIKSVISSKVQQETASFLLRYGDKK 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1130 563 ProSiteProfiles Myb-like domain profile. 462 519 IPR001005 -
Alju12g1130 563 Gene3D - 460 522 - -
Alju12g1130 563 PANTHER MYB TRANSCRIPTION FACTOR 1 520 - -
Alju12g1130 563 SMART sant 466 521 IPR001005 -
Alju12g1130 563 Pfam Myb-like DNA-binding domain 469 518 IPR001005 -
Alju12g1130 563 MobiDBLite consensus disorder prediction 448 469 - -
Alju12g1130 563 SUPERFAMILY Homeodomain-like 464 522 IPR009057 -
Alju12g1130 563 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 462 523 IPR017930 -
Alju12g1130 563 CDD SANT_TRF 469 520 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1130 Alju-ChrAlju12 31949089 31953111 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1130 470 518 Single Myb Histone (SMH) Gene Family AT1G15720 59.184 1.81e-08 54.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Alju12g1130 Myb_DNA-binding 7.8e-09 CL0123